RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 NAALADL1Q9UQQ1 740 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 EFR3BQ9Y2G0 817 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 MAGEB2O15479 319 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 VTNP04004 478 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 KRT7P08729 469 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 CYP2C8P10632 490 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 ARF4P18085 180 aaPredicted RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 GABRB2P47870 512 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 MORF4L2Q15014 288 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 LRRC14Q15048 493 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 TAZQ16635 292 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 HADHQ16836 314 aaKnown RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 SLC10A6Q3KNW5 377 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 KCNT1Q5JUK3 1230 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 RNASEH2BQ5TBB1 312 aaKnown RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 FBXW10Q5XX13 1052 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 EMC1Q8N766 993 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 CCT6BQ92526 530 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 CCDC77Q9BR77 488 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 ACTR5Q9H9F9 607 aaPredicted RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 TBK1Q9UHD2 729 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.32■□□□□ 0.04
TPM3-206ENST00000330188 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 GH1P01241 217 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 KDELR1P24390 212 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 PSMC4P43686 418 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 LACTB2Q53H82 288 aaPredicted RBP15.32■□□□□ 0.04
TPM3-206ENST00000330188 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 P3H4Q92791 437 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 MCRS1Q96EZ8 462 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
TPM3-206ENST00000330188 SGK1O00141 431 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 DNM1LO00429 736 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 BRAFP15056 766 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 OTUD4Q01804 1114 aaKnown RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 MPP2Q14168 576 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 FASTKD3Q14CZ7 662 aaKnown RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ILDR2Q71H61 639 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 PPTC7Q8NI37 304 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 CFAP57Q96MR6 1250 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ELAC2Q9BQ52 826 aaKnown RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 NSRP1Q9H0G5 558 aaKnown RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 KCNK9Q9NPC2 374 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 SAMD15Q9P1V8 674 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 SAE1Q9UBE0 346 aaPredicted RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 CITO14578 2027 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 COL1A2P08123 1366 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 M0QYV0 167 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 CST8O60676 142 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 GCAP28676 217 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 GPD2P43304 727 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 DYNLT1P63172 113 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ITIH4Q14624 930 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 TMEM132DQ14C87 1099 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 ANKS4BQ8N8V4 417 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ACTL9Q8TC94 416 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 AFG1LQ8WV93 481 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 DYDC1Q8WWB3 177 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 TTC25Q96NG3 672 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 FRMD8P1Q9BZ68 369 aaPredicted RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 VTA1Q9NP79 307 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 AGAP1Q9UPQ3 857 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 SHOC2Q9UQ13 582 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 ACTL7BQ9Y614 415 aa15.31■□□□□ 0.04
TPM3-206ENST00000330188 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.31■□□□□ 0.04
TPM3-206ENST00000330188 RBM47A0AV96 593 aaKnown RBP15.3■□□□□ 0.04
TPM3-206ENST00000330188 H0YHG0 523 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 NDC80O14777 642 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 IFNB1P01574 187 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 CD48P09326 243 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 VDRP11473 427 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 P4HA1P13674 534 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 MYO1EQ12965 1108 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 KYAT1Q16773 422 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 SRRM1Q8IYB3 904 aaKnown RBP15.3■□□□□ 0.04
TPM3-206ENST00000330188 TTC13Q8NBP0 860 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 CKAP2Q8WWK9 683 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 MAML1Q92585 1016 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 PRCCQ92733 491 aaPredicted RBP15.3■□□□□ 0.04
TPM3-206ENST00000330188 C16orf70Q9BSU1 422 aa15.3■□□□□ 0.04
TPM3-206ENST00000330188 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
TPM3-206ENST00000330188 EXOC1LA0A1B0GW35 172 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms