RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 BANF1O75531 89 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 ICAM3P32942 547 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 RFC5P40937 340 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 GPX6P59796 221 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 HHATQ5VTY9 493 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 ADAM33Q9BZ11 813 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 AGTPBP1Q9UPW5 1226 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 CHKBQ9Y259 395 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
BRCC3-201ENST00000330045 CEP83Q9Y592 693 aa16.15■□□□□ 0.18
BRCC3-201ENST00000330045 ALDH3A1P30838 453 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 CDH5P33151 784 aaPredicted RBP16.14■□□□□ 0.18
BRCC3-201ENST00000330045 GEMIN4P57678 1058 aaKnown RBP16.14■□□□□ 0.18
BRCC3-201ENST00000330045 GRM1Q13255 1194 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 SGSM1Q2NKQ1 1148 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 EFHC2Q5JST6 749 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 POLNQ7Z5Q5 900 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 TFAP2BQ92481 460 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.18
BRCC3-201ENST00000330045 SAE1Q9UBE0 346 aaPredicted RBP16.14■□□□□ 0.18
BRCC3-201ENST00000330045 PCDHGC3Q9UN70 934 aa16.14■□□□□ 0.18
BRCC3-201ENST00000330045 WDR90Q96KV7 1748 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
BRCC3-201ENST00000330045 DCTN3O75935 186 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 WEE2P0C1S8 567 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
BRCC3-201ENST00000330045 DYNLT1P63172 113 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 DUOXA2Q1HG44 320 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 PPIL6Q8IXY8 311 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 PYROXD1Q8WU10 500 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 NRBP2Q9NSY0 501 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 EFR3BQ9Y2G0 817 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
BRCC3-201ENST00000330045 IGKV6D-21A0A0A0MT36 114 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 C19orf81C9J6K1 198 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 FAM189A1O60320 539 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 TOM1L1O75674 476 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 KRT4P19013 534 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 PSMA2P25787 234 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 EPHX2P34913 555 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 PHBP35232 272 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 CLNS1AP54105 237 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 ARL4CP56559 192 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 OTUD4Q01804 1114 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 FSTL1Q12841 308 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 TRPC3Q13507 836 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 TARBP2Q15633 366 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 ACTL9Q8TC94 416 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 ZWILCHQ9H900 591 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 CLUHO75153 1309 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 SSTR1P30872 391 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 PSMC4P43686 418 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 GAD2Q05329 585 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 TFDP1Q14186 410 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 GPR162Q16538 588 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 PARP6Q2NL67 630 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 SMTNL2Q2TAL5 461 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 LVRNQ6Q4G3 990 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 CPT1BQ92523 772 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 UTP4Q969X6 686 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 LRMDAQ9H2I8 198 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 C10orf88Q9H8K7 445 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 SSU72Q9NP77 194 aaKnown RBP16.13■□□□□ 0.17
BRCC3-201ENST00000330045 FETUBQ9UGM5 382 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 STRIP2Q9ULQ0 834 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 CENPFP49454 3210 aa16.13■□□□□ 0.17
BRCC3-201ENST00000330045 CST8O60676 142 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 MSCO60682 206 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 ZWINTO95229 277 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 KRT7P08729 469 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 KRT3P12035 628 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 TARSP26639 723 aaKnown RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 GDF10P55107 478 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 SLC25A11Q02978 314 aaKnown RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 FNBP1LQ5T0N5 605 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 ANKRD22Q5VYY1 191 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 NAT8LQ8N9F0 302 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 ATP11CQ8NB49 1132 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 TTC13Q8NBP0 860 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 C10orf82Q8WW14 230 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 ZNF75CPQ92670 426 aaPredicted RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 PCYT2Q99447 389 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 PHACTR1Q9C0D0 580 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 MAF1Q9H063 256 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 HAO1Q9UJM8 370 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 OGTO15294 1046 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 DIAPH2O60879 1101 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 EFNA5P52803 228 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 TTLL12Q14166 644 aaPredicted RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 HADHQ16836 314 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms