RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 ADAMTS10Q9H324 1103 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 NINJ2Q9NZG7 142 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 ACTL7BQ9Y614 415 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 GJB6O95452 261 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 GH1P01241 217 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 CXCL8P10145 99 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 CYP3A5P20815 502 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 PHKA2P46019 1235 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 CLCN3P51790 818 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 FAM133BQ5BKY9 247 aaKnown RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 CMASQ8NFW8 434 aaPredicted RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 PAIP2Q9BPZ3 127 aaKnown RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 INSRRP14616 1297 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 MARK3P27448 753 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 GPD2P43304 727 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 ZNF410Q86VK4 478 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 ITGA11Q9UKX5 1188 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 DPYSL4O14531 572 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 STRNO43815 780 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 TNNC2P02585 160 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 STAG3L1P0CL83 205 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 GRM5P41594 1212 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 ADAM17P78536 824 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 LMNB2Q03252 620 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 XKR4Q5GH76 650 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 MFSD7Q6UXD7 560 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 FETUBQ9UGM5 382 aa12.64□□□□□ -0.39
NCL-201ENST00000322723 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
NCL-201ENST00000322723 KAT6AQ92794 2004 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 ZNF487B1APH4 448 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 F8VP50 259 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 MED7O43513 233 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 LRCH4O75427 683 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 FSBPO95073 299 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 HMGCRP04035 888 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 ERBB2P04626 1255 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 FGFR4P22455 802 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 HOXC8P31273 242 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 SLC18A1P54219 525 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 EPS8L3Q8TE67 593 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 DDX23Q9BUQ8 820 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 GAS8O95995 478 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 VCPP55072 806 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 IFI35P80217 286 aaPredicted RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 MXRA7P84157 204 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CNGA2Q16280 664 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 QPCTQ16769 361 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 LACTB2Q53H82 288 aaPredicted RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 EEPD1Q7L9B9 569 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 EXOC3L1Q86VI1 746 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CCDC89Q8N998 374 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CCDC63Q8NA47 563 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 UHMK1Q8TAS1 419 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 MIEF2Q96C03 454 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 E7ESA3 106 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 IL1R2P27930 398 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CCDC6Q16204 474 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 GPRC5AQ8NFJ5 357 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
NCL-201ENST00000322723 SAMD15Q9P1V8 674 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
NCL-201ENST00000322723 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 RANBP1P43487 201 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 POLE2P56282 527 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■□□ 17.3
NCL-201ENST00000322723 ATP13A4Q4VNC1 1196 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 ZC3H12AQ5D1E8 599 aaKnown RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 GKAP1Q5VSY0 366 aaPredicted RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 BBS12Q6ZW61 710 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 SMYD3Q9H7B4 428 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 DDX20Q9UHI6 824 aaKnown RBP12.62□□□□□ -0.39
NCL-201ENST00000322723 GPR32O75388 356 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 TMOD1P28289 359 aa12.62□□□□□ -0.39
NCL-201ENST00000322723 IFNAR2P48551 515 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms