RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KIAA1586Q9HCI6 787 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF232Q9UNY5 417 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 HPS5Q9UPZ3 1129 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 KCNN4O15554 427 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SRP72O76094 671 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 THRAP10827 490 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TCN1P20061 433 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SP100P23497 879 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AP3B2Q13367 1082 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SNX17Q15036 470 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ARL13BQ3SXY8 428 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PDCD4Q53EL6 469 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 TAF2Q6P1X5 1199 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SCAIQ8N9R8 606 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 VPS33BQ9H267 617 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 GREM2Q9H772 168 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 C8orf4Q9NR00 106 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 ADCY6O43306 1168 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CD44P16070 742 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 COMTP21964 271 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CASP5P51878 434 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 EIF3EP60228 445 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MECOMQ03112 1051 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 FASTKD1Q53R41 847 aaKnown RBP7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MFSD14BQ5SR56 506 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PRMT9Q6P2P2 845 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 CCNYL1Q8N7R7 359 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 PYDC1Q8WXC3 89 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 MCRS1Q96EZ8 462 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
SMC1A-201ENST00000322213 SIPA1L3O60292 1781 aaPredicted RBP7.34□□□□□ -1.24
SMC1A-201ENST00000322213 KANSL1LA0AUZ9 987 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 NUDT17P0C025 328 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 DLG4P78352 724 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 STX5Q13190 355 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 MYBPC2Q14324 1141 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 CNGA2Q16280 664 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 CNPY1Q3B7I2 92 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 EFCAB1Q9HAE3 211 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 SERPINB13Q9UIV8 391 aa7.34□□□□□ -1.24
SMC1A-201ENST00000322213 NPHP4O75161 1426 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ZSCAN5CA6NGD5 496 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CBX6O95503 412 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CDK16Q00536 496 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 AMPD2Q01433 879 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RNF220Q5VTB9 566 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 IYDQ6PHW0 289 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TAS2R42Q7RTR8 314 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GCNAQ96QF7 691 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ILKAPQ9H0C8 392 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RAD21L1Q9H4I0 556 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PNPLA3Q9NST1 481 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 A0A087X0T9 212 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 MEI4A8MW99 385 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RAD51BO15315 384 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CAMTA2O94983 1202 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 FAM228BP0C875 321 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF24P17028 368 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ITGA7Q13683 1181 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 LRRC8DQ7L1W4 858 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 NUP93Q8N1F7 819 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ATP6V1E2Q96A05 226 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 C9orf72Q96LT7 481 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GPC6Q9Y625 555 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PI4K2BG5E9Z4 385 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TNPO2O14787 897 aaKnown RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TFDP2Q14188 446 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 DGUOKQ16854 277 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ATAD3BQ5T9A4 648 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TRIM69Q86WT6 500 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CDKL3Q8IVW4 592 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GIPC3Q8TF64 312 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 DCUN1D5Q9BTE7 237 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 HSPBP1Q9NZL4 362 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 EME2A4GXA9 379 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SAGE2PA6NJ88 616 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 UFL1O94874 794 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ANPEPP15144 967 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GCLMP48507 274 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ITKQ08881 620 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TTI2Q6NXR4 508 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 NCCRP1Q6ZVX7 275 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SLC13A5Q86YT5 568 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CKAP2Q8WWK9 683 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RSPH1Q8WYR4 309 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ENTPD5O75356 428 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 MFN2O95140 757 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 HLA-DPA1P20036 260 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SARSP49591 514 aaKnown RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 OVGP1Q12889 678 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SPIDRQ14159 915 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms