RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GALNT4Q8N4A0 578 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 TBC1D10AQ9BXI6 508 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 MOCS2O96007 188 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 OTUD4Q01804 1114 aaKnown RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 TMEM259Q4ZIN3 620 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 ENOSF1Q7L5Y1 443 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 EXOC3L1Q86VI1 746 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 C4orf19Q8IY42 314 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 SPOCK2Q92563 424 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 KLHL8Q9P2G9 620 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 PHKA2P46019 1235 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 ROR1Q01973 937 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 KPNB1Q14974 876 aaKnown RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 TAF12Q16514 161 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 MROH9Q5TGP6 573 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 SIAH1Q8IUQ4 282 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 BSNDQ8WZ55 320 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 SERPINB12Q96P63 405 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 TUBB6Q9BUF5 446 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 ROPN1BQ9BZX4 212 aaPredicted RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 ROPN1Q9HAT0 212 aaPredicted RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 CYP3A7-CYP3A51PA0A087WV96 503 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 M0QZ92 97 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 KRT36O76013 467 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 CYP3A7P24462 503 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 CLK2P49760 499 aaKnown RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 FMO1Q01740 532 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 TATDN1Q6P1N9 297 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 C15orf52Q6ZUT6 534 aaKnown RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 ACOT1Q86TX2 421 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 RMDN2Q96LZ7 410 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 MYH13Q9UKX3 1938 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 GTPBP10A4D1E9 387 aaKnown RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 PRKCIP41743 596 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 MAP3K21Q5TCX8 1036 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 CRELD2Q6UXH1 353 aaPredicted RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 FITM2Q8N6M3 262 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 USP33Q8TEY7 942 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 LENG9Q96B70 501 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 NIF3L1Q9GZT8 377 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 XAB2Q9HCS7 855 aaKnown RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 ASNSD1Q9NWL6 643 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 SLC12A6Q9UHW9 1150 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 KRT7P08729 469 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 PECAM1P16284 738 aaPredicted RBP15.94■□□□□ 0.14
VARS2-201ENST00000321897 EML3Q32P44 896 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 TMEM161BQ8NDZ6 487 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 PGM2Q96G03 612 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 FAM111AQ96PZ2 611 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 TMEM165Q9HC07 324 aa15.94■□□□□ 0.14
VARS2-201ENST00000321897 NID2Q14112 1375 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 KAT6AQ92794 2004 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 MGRN1O60291 552 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 SUPT20HL2P0C7V6 817 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 TTLL4Q14679 1199 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 NUDCD3Q8IVD9 361 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 PCMTD2Q9NV79 361 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 TSR3Q9UJK0 312 aaKnown RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 R3HDM2Q9Y2K5 976 aaKnown RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 IGLV3-22A0A075B6J6 115 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 IQANK1A0A1B0GTG1 560 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 MAGEA13PA6NCF6 341 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 OSBPP22059 807 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 TNFRSF8P28908 595 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 PEX5P50542 639 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 SH3BGRP55822 239 aaPredicted RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 RNF135Q8IUD6 432 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 ATP11CQ8NB49 1132 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 ICA1LQ8NDH6 482 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 PIN4Q9Y237 131 aaKnown RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 A0A087WZ62 844 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 KIAA0391O15091 583 aaKnown RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 BMPR2Q13873 1038 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 CLEC16AQ2KHT3 1053 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 ASAP3Q8TDY4 903 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 CDKL2Q92772 493 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 NSL1Q96IY1 281 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 FDXACB1Q9BRP7 624 aaPredicted RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 RANBP17Q9H2T7 1088 aaKnown RBP15.93■□□□□ 0.14
VARS2-201ENST00000321897 GGA2Q9UJY4 613 aa15.93■□□□□ 0.14
VARS2-201ENST00000321897 UMODL1Q5DID0 1318 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 TAF1P21675 1872 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 MYL3P08590 195 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 HOXD13P35453 343 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 SNX16P57768 344 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 USP4Q13107 963 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 SGSM1Q2NKQ1 1148 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 PID1Q7Z2X4 250 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 SCFD2Q8WU76 684 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 MAGEB18Q96M61 343 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 OLFM3Q96PB7 478 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 APOL2Q9BQE5 337 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 KLC2Q9H0B6 622 aa15.92■□□□□ 0.14
VARS2-201ENST00000321897 C12orf65Q9H3J6 166 aaKnown RBP15.92■□□□□ 0.14
VARS2-201ENST00000321897 CORO1CQ9ULV4 474 aaPredicted RBP15.92■□□□□ 0.14
VARS2-201ENST00000321897 SPDYE5A6NIY4 337 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms