RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SMYD2Q9NRG4 433 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 C12orf56Q8IXR9 622 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 LENG9Q96B70 501 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 FHDC1Q9C0D6 1143 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 EBF2Q9HAK2 575 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 EPS15L1Q9UBC2 864 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 LIASO43766 372 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SNUPNO95149 360 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 RFC5P40937 340 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 TAS2R40P59535 323 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 STXBP2Q15833 593 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 LLGL2Q6P1M3 1020 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 TTC8Q8TAM2 541 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 PSPC1Q8WXF1 523 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 LPAR1Q92633 364 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 TRIM56Q9BRZ2 755 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF70Q9UC06 446 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 F5H423 210 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 PDGFRAP16234 1089 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 STIP1P31948 543 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 DSG1Q02413 1049 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ART3Q13508 389 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 TRIP10Q15642 601 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 OTOAQ7RTW8 1153 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF668Q96K58 619 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 SLC38A10Q9HBR0 1119 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 LGALS13Q9UHV8 139 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 CHRNB2P17787 502 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 TYK2P29597 1187 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 PDZD4Q76G19 769 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 SLC51AQ86UW1 340 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 CDKL3Q8IVW4 592 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 FRMD8P1Q9BZ68 369 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ARMCX1Q9P291 453 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 MAGED2Q9UNF1 606 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 FAF1Q9UNN5 650 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 C2CD2LO14523 706 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 APOL1O14791 398 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 CDK16Q00536 496 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 FAXCQ5TGI0 409 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 MROH9Q5TGP6 573 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 CYP4X1Q8N118 509 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF398Q8TD17 642 aa13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 RPAP3Q9H6T3 665 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-202ENST00000321117 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 IGLV3-22A0A075B6J6 115 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 F8VP50 259 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 PIAS1O75925 651 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 ALADP13716 330 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 SERPINB9P50453 376 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 BLMHQ13867 455 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 IZUMO2Q6UXV1 221 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 SYTL5Q8TDW5 730 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 RNF34Q969K3 372 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 KLHL2O95198 593 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 FDX1P10109 184 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 ELK3P41970 407 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 EFNA5P52803 228 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 SLC26A11Q86WA9 606 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 TMPRSS6Q8IU80 811 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 MAB21L3Q8N8X9 362 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 FBXO40Q9UH90 709 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 USP20Q9Y2K6 914 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 PCDHAC2Q9Y5I4 1007 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 PIK3R2O00459 728 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 MAFGO15525 162 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 GPC4O75487 556 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 ITGB5P18084 799 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 AQP5P55064 265 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 TRMT5Q32P41 509 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 OXNAD1Q96HP4 312 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 RPL26L1Q9UNX3 145 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 ZMYM2Q9UBW7 1377 aa13.31□□□□□ -0.28
DNMT3A-202ENST00000321117 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms