RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 TMEM63BQ5T3F8 832 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 TTC39CQ8N584 583 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 FAM84AQ96KN4 292 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 NLRP4Q96MN2 994 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
CHFR-202ENST00000315585 NAALADL1Q9UQQ1 740 aa15.7■□□□□ 0.1
CHFR-202ENST00000315585 CFAP73A6NFT4 308 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 H3BRB1 525 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 KRT3P12035 628 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 PROZP22891 400 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 BRD2P25440 801 aaKnown RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 TNFSF9P41273 254 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 GSCP56915 257 aaPredicted RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 PPARDQ03181 441 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 CCDC38Q502W7 563 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 ZNF667Q5HYK9 610 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 PPP1R15BQ5SWA1 713 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 MFSD7Q6UXD7 560 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 MAGEB18Q96M61 343 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 FZD8Q9H461 694 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 TUT1Q9H6E5 874 aaKnown RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 DNPEPQ9ULA0 475 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 hCG_1818297A0A087WSY0 165 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 EXOC1LA0A1B0GW35 172 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 LRRD1A4D1F6 860 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 INO80B-WBP1J3KQ70 363 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 WEE2P0C1S8 567 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 HOXD8P13378 290 aaPredicted RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 SMPD1P17405 629 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 MORN1Q5T089 497 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 SWT1Q5T5J6 900 aaKnown RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 INO80BQ9C086 356 aaPredicted RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
CHFR-202ENST00000315585 SMG5Q9UPR3 1016 aaKnown RBP15.69■□□□□ 0.1
CHFR-202ENST00000315585 MMP3P08254 477 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 PSMA2P25787 234 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 ATICP31939 592 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 PHBP35232 272 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 CLCN3P51790 818 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 IGBP1P78318 339 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 GPS1Q13098 491 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 ZNF268Q14587 947 aaPredicted RBP15.68■□□□□ 0.1
CHFR-202ENST00000315585 SEZ6Q53EL9 994 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 GJC2Q5T442 439 aaPredicted RBP15.68■□□□□ 0.1
CHFR-202ENST00000315585 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 IFNLR1Q8IU57 520 aaPredicted RBP15.68■□□□□ 0.1
CHFR-202ENST00000315585 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 SYNCQ9H7C4 482 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 SAYSD1Q9NPB0 183 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 FETUBQ9UGM5 382 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 TCP11X1B4DZS4 312 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 RASA4BC9J798 803 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 F8VP50 259 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 DNM1LO00429 736 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 CHUKO15111 745 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 RASA4O43374 803 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 HOXC6P09630 235 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 CDKN2BP42772 138 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 FAM187BQ17R55 369 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 DAB2IPQ5VWQ8 1189 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 NUGGCQ68CJ6 796 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 C9orf72Q96LT7 481 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 CYP3A43Q9HB55 503 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 PTPRHQ9HD43 1115 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 SLC24A2Q9UI40 661 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 ARL2BPQ9Y2Y0 163 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 UTRNP46939 3433 aa15.68■□□□□ 0.1
CHFR-202ENST00000315585 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 FAM47DPA6NHR8 397 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 RRN3P2A6NIE6 340 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 SGK1O00141 431 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 ALOX15BO15296 676 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 RNF8O76064 485 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 EDN1P05305 212 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 KRT10P13645 584 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 CD19P15391 556 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 ASPAP45381 313 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 OASLQ15646 514 aaKnown RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 ZNF394Q53GI3 561 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 ZFYVE28Q9HCC9 887 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 DNAJC17Q9NVM6 304 aaKnown RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 PI4K2BG5E9Z4 385 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 ABLIM1O14639 778 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 MBTD1Q05BQ5 628 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 SREBF2Q12772 1141 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 UBAP2Q5T6F2 1119 aaKnown RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 SRRM1Q8IYB3 904 aaKnown RBP15.67■□□□□ 0.1
CHFR-202ENST00000315585 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms