RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 BBS12Q6ZW61 710 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 PLPPR4Q7Z2D5 763 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 XYLT1Q86Y38 959 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 ZBED8Q8IZ13 594 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 NLRP4Q96MN2 994 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 TWNKQ96RR1 684 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 CPXM1Q96SM3 734 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 SMYD3Q9H7B4 428 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 ECT2Q9H8V3 914 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 HMGXB4Q9UGU5 601 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 PNMA3Q9UL41 463 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 CLUHO75153 1309 aa16■□□□□ 0.15
SPIRE1-201ENST00000309836 CFAP73A6NFT4 308 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 GOLGA8MH3BSY2 632 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 NFICP08651 508 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 KDELR1P24390 212 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CLCN3P51790 818 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 IL9RQ01113 521 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 PLCB3Q01970 1234 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 BNIP1Q12981 228 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 KCNT1Q5JUK3 1230 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CENPUQ71F23 418 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 TBC1D1Q86TI0 1168 aaPredicted RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 ANKMY2Q8IV38 441 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 EMC1Q8N766 993 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 ANKLE1Q8NAG6 615 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 COPS5Q92905 334 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 ELOVL4Q9GZR5 314 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 METTL5Q9NRN9 209 aaKnown RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 GRID1Q9ULK0 1009 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 EFR3BQ9Y2G0 817 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 MED7O43513 233 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CST8O60676 142 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 ATP6V1G2O95670 118 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CD48P09326 243 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 IQCF3P0C7M6 154 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 POLR2BP30876 1174 aaKnown RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CTCFP49711 727 aaPredicted RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 GSCP56915 257 aaPredicted RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 MSS51Q4VC12 460 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 FNBP1LQ5T0N5 605 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 FITM2Q8N6M3 262 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 C1orf127Q8N9H9 656 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 SLC4A11Q8NBS3 891 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 MAGEC3Q8TD91 643 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 FNIP1Q8TF40 1166 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 CPT1BQ92523 772 aa15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 WDR83Q9BRX9 315 aaKnown RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
SPIRE1-201ENST00000309836 GPR25O00155 361 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 MAGEB2O15479 319 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 IL18RAPO95256 599 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 KRT19P08727 400 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 KRT7P08729 469 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 NQO1P15559 274 aaKnown RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 RPL22P35268 128 aaKnown RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 KCNJ2P63252 427 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 TFDP1Q14186 410 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 EFTUD2Q15029 972 aaKnown RBP eCLIP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 TAF5Q15542 800 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 ZNF667Q5HYK9 610 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 EFHC2Q5JST6 749 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 RNF43Q68DV7 783 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 FAM47EQ6ZV65 393 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 C4orf33Q8N1A6 199 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 SPATA33Q96N06 139 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 PAIP2Q9BPZ3 127 aaKnown RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 PLCD4Q9BRC7 762 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 ASCC2Q9H1I8 757 aaPredicted RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 RPF1Q9H9Y2 349 aaKnown RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 RXFP1Q9HBX9 757 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 ZMYND8Q9ULU4 1186 aaPredicted RBP15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 TNFSF13BQ9Y275 285 aa15.98■□□□□ 0.15
SPIRE1-201ENST00000309836 LACTBL1A8MY62 500 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 NDC80O14777 642 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 MICAL2O94851 1124 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 SLC18A1P54219 525 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 IRX3P78415 501 aaPredicted RBP15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 HIF1AQ16665 826 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 TMEM132AQ24JP5 1023 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 PREPLQ4J6C6 727 aaPredicted RBP15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 FBXO16Q8IX29 292 aaPredicted RBP15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 PPIL6Q8IXY8 311 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 NAT8LQ8N9F0 302 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 CXorf38Q8TB03 319 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 MRRFQ96E11 262 aaKnown RBP15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 FRMD8P1Q9BZ68 369 aaPredicted RBP15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 TXNRD2Q9NNW7 524 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 SLC24A2Q9UI40 661 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 RABGEF1Q9UJ41 708 aa15.97■□□□□ 0.15
SPIRE1-201ENST00000309836 A0A0G2JLL6 359 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms