RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 RAB21Q9UL25 225 aa17.05■□□□□ 0.32
BRD3-201ENST00000303407 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
BRD3-201ENST00000303407 TRIM49D1C9J1S8 452 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 VWA5AO00534 786 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 CES2O00748 559 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 CYP2C8P10632 490 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 C3orf20Q8ND61 904 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 PJA2O43164 708 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 FDFT1P37268 417 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 FKBP1AP62942 108 aaKnown RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 NIPA1Q7RTP0 329 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 CNPY4Q8N129 248 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 FBXO25Q8TCJ0 367 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 SEPT5Q99719 369 aaPredicted RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 TRPC7Q9HCX4 862 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 RNF103-CHMP3A0A140T963 221 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 M0QYT0 321 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 AARSP49588 968 aaKnown RBP eCLIP17.04■□□□□ 0.326e-8■■■■■ 39.3
BRD3-201ENST00000303407 ARHGDIAP52565 204 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 LBRQ14739 615 aaKnown RBP17.04■□□□□ 0.32
BRD3-201ENST00000303407 TMEM259Q4ZIN3 620 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 CD302Q8IX05 232 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 MCOLN2Q8IZK6 566 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 ARMC2Q8NEN0 867 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 MAGEB18Q96M61 343 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 GPATCH2LQ9NWQ4 482 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 A0A0U1RQJ8 604 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 ESRRBO95718 433 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 CYP3A4P08684 503 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 SERPINB4P48594 390 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 DDR1Q08345 913 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 TRADDQ15628 312 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 RAET1EQ8TD07 263 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 PPP1R2P1Q96PQ5 205 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 PHTF1Q9UMS5 762 aa17.04■□□□□ 0.32
BRD3-201ENST00000303407 STMN1P16949 149 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 MMP14P50281 582 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 PDK2Q15119 407 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 TMEM121Q9BTD3 319 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 MMTAG2Q9BU76 263 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 CDYLQ9Y232 598 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 KCNA2P16389 499 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 RHBDL3P58872 404 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 ITIH4Q14624 930 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 PRPF39Q86UA1 669 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 PTGER2P43116 358 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 LY6KQ17RY6 165 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 ABRAQ8N0Z2 381 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 HDAC7Q8WUI4 952 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 DDX3XO00571 662 aaKnown RBP eCLIP17.03■□□□□ 0.326e-10■■■□□ 18
BRD3-201ENST00000303407 KLRC4O43908 158 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 MAP3K6O95382 1288 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 NNMTP40261 264 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 C15orf52Q6ZUT6 534 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 CCDC33Q8N5R6 958 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 FAM172AQ8WUF8 416 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 ZNF669Q96BR6 464 aaPredicted RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 TMEM176AQ96HP8 235 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 FAM111AQ96PZ2 611 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 USP18Q9UMW8 372 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 DNAJC8O75937 253 aaPredicted RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 KLHL2O95198 593 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 SNX17Q15036 470 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 CCNG2Q16589 344 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 TMA16Q96EY4 203 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 XAB2Q9HCS7 855 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
BRD3-201ENST00000303407 ZC3H4Q9UPT8 1303 aaKnown RBP17.03■□□□□ 0.32
BRD3-201ENST00000303407 ZSCAN5CA6NGD5 496 aaPredicted RBP17.02■□□□□ 0.32
BRD3-201ENST00000303407 DNAJC6O75061 913 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 TFRCP02786 760 aaKnown RBP17.02■□□□□ 0.32
BRD3-201ENST00000303407 TGFB2P61812 414 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 PDCD2Q16342 344 aaPredicted RBP17.02■□□□□ 0.32
BRD3-201ENST00000303407 MIIPQ5JXC2 388 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 IL31Q6EBC2 164 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 ING2Q9H160 280 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 INPP1P49441 399 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 GTF2A2P52657 109 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 EVX2Q03828 476 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 CBWD6Q4V339 395 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 CBWD3Q5JTY5 395 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 CBWD5Q5RIA9 395 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 MROH8Q9H579 483 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
BRD3-201ENST00000303407 KCNH4Q9UQ05 1017 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms