RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TTC26A0AVF1 554 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 KBTBD13C9JR72 458 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 S100A9P06702 114 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 AKR1B1P15121 316 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 VHLP40337 213 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PGS1Q32NB8 556 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 GALNTL6Q49A17 601 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TRPM8Q7Z2W7 1104 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 SLC30A5Q8TAD4 765 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 IARS2Q9NSE4 1012 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ASAP1Q9ULH1 1129 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PADI4Q9UM07 663 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 MAP3K4Q9Y6R4 1608 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF862O60290 1169 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CPSF4O95639 269 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PIGHQ14442 188 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TMEM132DQ14C87 1099 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF57Q68EA5 555 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 DENND6AQ8IWF6 608 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 DHX40Q8IX18 779 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF669Q96BR6 464 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TMEM47Q9BQJ4 181 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PIH1D3Q9NQM4 214 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PDP2Q9P2J9 529 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TET3O43151 1660 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 C21orf2O43822 256 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 SASH1O94885 1247 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF682O95780 498 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TFE3P19532 575 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ATP6V1B2P21281 511 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PTGER2P43116 358 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TXNRD1Q16881 649 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZSWIM7Q19AV6 140 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PLEKHA7Q6IQ23 1121 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 SRLQ86TD4 932 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 IZUMO1Q8IYV9 350 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 OSBPL3Q9H4L5 887 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 KLHL1Q9NR64 748 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 RNF112Q9ULX5 631 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 KIAA0391O15091 583 aaKnown RBP10.77□□□□□ -0.68
CLIP1-201ENST00000302528 VCLP18206 1134 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 NOS3P29474 1203 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 RALGDSQ12967 914 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 SPP2Q13103 211 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 PDZK1Q5T2W1 519 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 LRIG3Q6UXM1 1119 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 FRMD5Q7Z6J6 570 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 LRRC49Q8IUZ0 686 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 PHACTR4Q8IZ21 702 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 CAMKK1Q8N5S9 505 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 TERB1Q8NA31 727 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 RUBCNQ92622 972 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 FRMD6Q96NE9 622 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 S100A13Q99584 98 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 LRRC1Q9BTT6 524 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 EPC1Q9H2F5 836 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 CPVLQ9H3G5 476 aa10.77□□□□□ -0.68
CLIP1-201ENST00000302528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SKAP2O75563 359 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 CDH18Q13634 790 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 KLHL17Q6TDP4 642 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 COQ6Q9Y2Z9 468 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 IQCA1LA6NCM1 817 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 LRRC14BA6NHZ5 514 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 TBC1D12O60347 775 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SUPT7LO94864 414 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 CNPP09543 421 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ALDH1A3P47895 512 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 CDC42EP1Q00587 391 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 IKBIPQ70UQ0 350 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 B3GALNT2Q8NCR0 500 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 MDM1Q8TC05 714 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SEC16BQ96JE7 1060 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 TDRD3Q9H7E2 651 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 DYRK1BQ9Y463 629 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 MAGEA13PA6NCF6 341 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 MGAT4DA6NG13 374 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 VPS26AO75436 327 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 GRAP2O75791 330 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 TXNP10599 105 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ACADSP16219 412 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 FNTAP49354 379 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms