RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 POU1F1P28069 291 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ATP12AP54707 1039 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 CENPLQ8N0S6 344 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 RALAP11233 206 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 AVPR1AP37288 418 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ALDH6A1Q02252 535 aaKnown RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ARMC3Q5W041 872 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 TRAPPC11Q7Z392 1133 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ATPAF2Q8N5M1 289 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 ZNF669Q96BR6 464 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 TINF2Q9BSI4 451 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 MRPL39Q9NYK5 338 aaKnown RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 SLC34A1Q06495 639 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 PPP1R18Q6NYC8 613 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 FAM81AQ8TBF8 368 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 USP13Q92995 863 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 EFHD2Q96C19 240 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 LRCH1Q9Y2L9 728 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 CNOT3O75175 753 aaKnown RBP15.42■□□□□ 0.06
SCN3B-201ENST00000299333 NCF4Q15080 339 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 TMEM179Q6ZVK1 233 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 TTC39CQ8N584 583 aa15.42■□□□□ 0.06
SCN3B-201ENST00000299333 GRAP2O75791 330 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 ARPC4P59998 168 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TRIQKQ629K1 86 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 OLFM1Q99784 485 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 RAVER2Q9HCJ3 691 aaKnown RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CTNNAL1Q9UBT7 734 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 ASAP1Q9ULH1 1129 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 DNAJC16Q9Y2G8 782 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 A0A1W2PQJ5 194 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 MTRF1O75570 445 aaKnown RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 FLT3P36888 993 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TALDO1P37837 337 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 IL5RAQ01344 420 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 PDZK1Q5T2W1 519 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 VPS37AQ8NEZ2 397 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 KRT35Q92764 455 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CNKSR1Q969H4 720 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 KIF12Q96FN5 646 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 RMND5BQ96G75 393 aaPredicted RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 E9PBE3 544 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 F8W810 466 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 PHGDHO43175 533 aaKnown RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 KLHL41O60662 606 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 RBP3P10745 1247 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 POU4F1Q01851 419 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TRAF2Q12933 501 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 STK4Q13043 487 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CHSY1Q86X52 802 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 SUN5Q8TC36 379 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 JADE3Q92613 823 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 CENPTQ96BT3 561 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 ANKRD27Q96NW4 1050 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 GHRP10912 638 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 RCAN1P53805 252 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 MAPK7Q13164 816 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 ISLR2Q6UXK2 745 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 LRRC6Q86X45 466 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 EMC3Q9P0I2 261 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 FAM205CA6NFA0 338 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 PEX5P50542 639 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 WASHC2DQ5SRD0 308 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TAF2Q6P1X5 1199 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 IPMKQ8NFU5 416 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 FHDC1Q9C0D6 1143 aaPredicted RBP15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
SCN3B-201ENST00000299333 TRIM43BA6NCK2 446 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 EEF2KO00418 725 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 RHOBTB3O94955 611 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 MYL3P08590 195 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 MLNP12872 115 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 AP3M2P53677 418 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 PSMC5P62195 406 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 TRMT5Q32P41 509 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 EFL1Q7Z2Z2 1120 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 LRRC49Q8IUZ0 686 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 ACSF2Q96CM8 615 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 B3GALT6Q96L58 329 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 TMEM237Q96Q45 408 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 C2orf40Q9H1Z8 148 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 COPG2Q9UBF2 871 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 CHKBQ9Y259 395 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 PEX1O43933 1283 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 TNFRSF21O75509 655 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 MED26O95402 600 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 PLEKP08567 350 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 YY1P25490 414 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 AKT1P31749 480 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 PRIM2P49643 509 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms