RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ETS1P14921 441 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
UBAP1-201ENST00000297661 SP2Q02086 613 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 ZNF394Q53GI3 561 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 BRDTQ58F21 947 aaPredicted RBP16.38■□□□□ 0.21
UBAP1-201ENST00000297661 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 OR5B17Q8NGF7 314 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 SPIRE2Q8WWL2 714 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 ATP6V0A1Q93050 837 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
UBAP1-201ENST00000297661 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 TCEA3O75764 348 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ASMTLO95671 621 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ITIH2P19823 946 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 GNA15P30679 374 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 HMGCS2P54868 508 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 FAM182AQ5T1J6 154 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 HHATQ5VTY9 493 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 MON1BQ7L1V2 547 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ANKRD35Q8N283 1001 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 SAMD3Q8N6K7 520 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 TARS2Q9BW92 718 aaKnown RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 CADM1Q9BY67 442 aaKnown RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ZFP69BQ9UJL9 534 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 AGO2Q9UKV8 859 aaKnown RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 PDLIM1O00151 329 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 SPAG7O75391 227 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 GAS8O95995 478 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 FDX1P10109 184 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 MAMLD1Q13495 774 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 PTK6Q13882 451 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 RASIP1Q5U651 963 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ZNF365Q70YC5 407 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 USP37Q86T82 979 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
UBAP1-201ENST00000297661 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 ABT1Q9ULW3 272 aaKnown RBP16.37■□□□□ 0.21
UBAP1-201ENST00000297661 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 TBX10O75333 385 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 DGAT1O75907 488 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 PROSCO94903 275 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 UBTFL6P0CB48 400 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ATF7P17544 494 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 GHRHRQ02643 423 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 MAP3K10Q02779 954 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 SLC34A1Q06495 639 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 MCL1Q07820 350 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 MTM1Q13496 603 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ZRSR2Q15696 482 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ZACNQ401N2 412 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 C15orf39Q6ZRI6 1047 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 OSBPL8Q9BZF1 889 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 RBAKQ9NYW8 714 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ARHGAP28Q9P2N2 729 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 SLC9A2Q9UBY0 812 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 NUB1Q9Y5A7 615 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ACTL7BQ9Y614 415 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 TLR3O15455 904 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 EXTL3O43909 919 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 PSAPP07602 524 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 ACO1P21399 889 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 GTF2H1P32780 548 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 KPNB1Q14974 876 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 EMC2Q15006 297 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 CNPY1Q3B7I2 92 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 SUPT20HL1Q3ZLR7 823 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 TAB3Q8N5C8 712 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 LNPEPQ9UIQ6 1025 aa16.36■□□□□ 0.21
UBAP1-201ENST00000297661 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.36■□□□□ 0.21
UBAP1-201ENST00000297661 KIAA1217Q5T5P2 1943 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 EDF1O60869 148 aaKnown RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 GARTP22102 1010 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 CENPCQ03188 943 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 CUL2Q13617 745 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 TMED2Q15363 201 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 P3H1Q32P28 736 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PPFIBP2Q8ND30 876 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 CFAP61Q8NHU2 1237 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 VCX3BQ9H321 246 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 VCX3AQ9NNX9 186 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 TTC36A6NLP5 189 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 PIAS1O75925 651 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 CYP1A1P04798 512 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 ZCCHC18P0CG32 403 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 NOMO3P69849 1222 aa16.35■□□□□ 0.21
UBAP1-201ENST00000297661 KLF1Q13351 362 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-201ENST00000297661 TXNRD3NBQ6F5E7 133 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms