RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 YTHDF3Q7Z739 585 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 SUGP1Q8IWZ8 645 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 CCDC77Q9BR77 488 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 MICAL2O94851 1124 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 FSBPO95073 299 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 LGALS2P05162 132 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 OSBPP22059 807 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 STX2P32856 288 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 PHKA2P46019 1235 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 LMNB2Q03252 620 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 PDIA2Q13087 525 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 TNFAIP8L3Q5GJ75 292 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 FAM102AQ5T9C2 384 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 PPP1R2P3Q6NXS1 205 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 RFX6Q8HWS3 928 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ZCCHC9Q8N567 271 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 SLC4A11Q8NBS3 891 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 KCTD6Q8NC69 237 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 KCNN1Q92952 543 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 HAUS2Q9NVX0 235 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 TPX2Q9ULW0 747 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 CEP350Q5VT06 3117 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 CXCL11O14625 94 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 MAP3K6O95382 1288 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ATP5DP30049 168 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ADCYAP1R1P41586 468 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 RGS7P49802 495 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 C12orf29Q8N999 325 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 STRIP2Q9ULQ0 834 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 PCDHGC3Q9UN70 934 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 TNFSF13BQ9Y275 285 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 LOC285556D6RIA3 1793 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 MED7O43513 233 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ARF4P18085 180 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 KRT15P19012 456 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 HPDLQ96IR7 371 aa16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 ATXN2Q99700 1313 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-201ENST00000294129 CDH16O75309 829 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 SCTRP47872 440 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 MMRN1Q13201 1228 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 FAM47EQ6ZV65 393 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 C4orf33Q8N1A6 199 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 LRRN4Q8WUT4 740 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 PIWIL1Q96J94 861 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 CXCL16Q9H2A7 254 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 ANK1P16157 1881 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 SIGLEC16A6NMB1 481 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 SLC25A11Q02978 314 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 ANKRD22Q5VYY1 191 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 MAP1SQ66K74 1059 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 ZC3H18Q86VM9 953 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 RSAD2Q8WXG1 361 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 ADPGKQ9BRR6 497 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 MAF1Q9H063 256 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 NSRP1Q9H0G5 558 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 ABCF3Q9NUQ8 709 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 PRMT7Q9NVM4 692 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 DDX56Q9NY93 547 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 NKIRAS1Q9NYS0 192 aa16.61■□□□□ 0.25
NCKIPSD-201ENST00000294129 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 MIPP30301 263 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 CTCFP49711 727 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 ATP11AP98196 1134 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 ARHGAP1Q07960 439 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 OASLQ15646 514 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 SLC10A6Q3KNW5 377 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 SCYL2Q6P3W7 929 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 NPNTQ6UXI9 565 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 TMEM176AQ96HP8 235 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 FAM49AQ9H0Q0 323 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 CCT8L1PA6NM43 557 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 TAP1Q03518 808 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 LRRC38Q5VT99 294 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 OR6B2Q6IFH4 312 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 EXOC8Q8IYI6 725 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 FAM71DQ8N9W8 422 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 CCT6BQ92526 530 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 GGA2Q9UJY4 613 aa16.6■□□□□ 0.25
NCKIPSD-201ENST00000294129 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 RNF8O76064 485 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 IL18RAPO95256 599 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 KDELR1P24390 212 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 ADORA2AP29274 412 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 GJA5P36382 358 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 NDST1P52848 882 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 BASP1P80723 227 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 MOGSQ13724 837 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms