RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MRPL42Q9Y6G3 142 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 PJA2O43164 708 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 TADA2AO75478 443 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 B3GAT3O94766 335 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 LINC00271P0C7V0 271 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CHRNB2P17787 502 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 BTG3Q14201 252 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CNGA2Q16280 664 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CLEC16AQ2KHT3 1053 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 SGO2Q562F6 1265 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC47A2Q86VL8 602 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 FIBCD1Q8N539 461 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC63Q8NA47 563 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 CEP295NLQ96MC4 621 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 PKMYT1Q99640 499 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ZCWPW1Q9H0M4 648 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 BACE2Q9Y5Z0 518 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 EPN1Q9Y6I3 576 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 VWA8A3KMH1 1905 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 SOWAHDA6NJG2 315 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 WEE2P0C1S8 567 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 RPL34P49207 117 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 FMO1Q01740 532 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 GEN1Q17RS7 908 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 FUT10Q6P4F1 479 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 FAM171BQ6P995 826 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 DCUN1D2Q6PH85 259 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 LCLAT1Q6UWP7 414 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 OTOP2Q7RTS6 562 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 RYBPQ8N488 228 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 GSDMBQ8TAX9 411 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 LNX1Q8TBB1 728 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 VCPIP1Q96JH7 1222 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PAAF1Q9BRP4 392 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 ZMYND8Q9ULU4 1186 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 SOD2P04179 222 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC175P0C221 793 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 TNFAIP3P21580 790 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 MAGEA10P43363 369 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 CENPCQ03188 943 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 ANKS3Q6ZW76 656 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 GDF15Q99988 308 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PAIP2Q9BPZ3 127 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 MIS12Q9H081 205 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PIDD1Q9HB75 910 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PCDHB12Q9Y5F1 795 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 A0A0A6YYK5 440 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 NCANO14594 1321 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 THAP12O43422 761 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 RTN2O75298 545 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 SNX16P57768 344 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 INTS6LQ5JSJ4 861 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 KCNT2Q6UVM3 1135 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 RAD9BQ6WBX8 426 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 OSTM1Q86WC4 334 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 HNRNPABQ99729 332 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 ISCUQ9H1K1 167 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 SPG21Q9NZD8 308 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 FAM169AQ9Y6X4 670 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PLXNA3P51805 1871 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 PLXNA4Q9HCM2 1894 aa8.92□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA6CA6NDK9 693 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA6BA6NDN3 693 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 A8MXQ7 604 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TBC1D4O60343 1298 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TUBB4AP04350 444 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 RB1P06400 928 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA6DP0CG33 693 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 CD58P19256 250 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 VAV2P52735 878 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 USP41Q3LFD5 358 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 WSCD1Q658N2 575 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF280DQ6N043 979 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PHF13Q86YI8 300 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 DCP1BQ8IZD4 617 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TMEM130Q8N3G9 435 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PIK3R5Q8WYR1 880 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 NOX5Q96PH1 765 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 CHP1Q99653 195 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 FAM107BQ9H098 131 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ABCB6Q9NP58 842 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA6AQ9NYA3 693 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 O00370 1275 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC4A1P02730 911 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 UNGP13051 313 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SYN1P17600 705 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TSPY1Q01534 308 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 YWHAHQ04917 246 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PKDCCQ504Y2 493 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 OVOS1Q6IE37 1185 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SCYL2Q6P3W7 929 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ZSCAN30Q86W11 494 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 B3GALNT2Q8NCR0 500 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 OR6B3Q8NGW1 331 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms