RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ARFIP2P53365 341 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 DNAJC3Q13217 504 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 FASTKD5Q7L8L6 764 aaKnown RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ZC3H18Q86VM9 953 aaKnown RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 BEST2Q8NFU1 509 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 RILPQ96NA2 401 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 HEY1Q9Y5J3 304 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 MYH11P35749 1972 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 hCG_1818297A0A087WSY0 165 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 SIGLEC16A6NMB1 481 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 XRCC4Q13426 336 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 MTFR1Q15390 333 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 CFAP157Q5JU67 520 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 DRICH1Q6PGQ1 229 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 NT5C1AQ9BXI3 368 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 A0A0G2JND7 137 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 ITGB3P05106 788 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 RPSAP08865 295 aaKnown RBP10.52□□□□□ -0.72
HMGCR-201ENST00000287936 BOLA3Q53S33 107 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 C1orf228Q6PIY5 440 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 PIGWQ7Z7B1 504 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 PPM1NQ8N819 430 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 PPP4R1Q8TF05 950 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 KAT2BQ92831 832 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 KIF12Q96FN5 646 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 HPDLQ96IR7 371 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 FAM84AQ96KN4 292 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 ACO2Q99798 780 aaKnown RBP10.52□□□□□ -0.72
HMGCR-201ENST00000287936 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF214Q9UL59 606 aaPredicted RBP10.52□□□□□ -0.72
HMGCR-201ENST00000287936 EFR3BQ9Y2G0 817 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 STYXL1Q9Y6J8 313 aa10.52□□□□□ -0.72
HMGCR-201ENST00000287936 ATP6V1G2O95670 118 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 PPP6R3Q5H9R7 873 aaPredicted RBP10.52□□□□□ -0.73
HMGCR-201ENST00000287936 FAM71DQ8N9W8 422 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 FBXO36Q8NEA4 188 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 OR6B3Q8NGW1 331 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
HMGCR-201ENST00000287936 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 MCF2P10911 925 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 TSHRP16473 764 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 RPL7AP62424 266 aaKnown RBP10.52□□□□□ -0.73
HMGCR-201ENST00000287936 PTK7Q13308 1070 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 FOCADQ5VW36 1801 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 RNF43Q68DV7 783 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 C7orf31Q8N865 590 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 CNPY3Q9BT09 278 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 ELP3Q9H9T3 547 aa10.52□□□□□ -0.73
HMGCR-201ENST00000287936 KCNN4O15554 427 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 VNN1O95497 513 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ESRRAP11474 423 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 KRT4P19013 534 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ELF3P78545 371 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 PDK2Q15119 407 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 CATSPER4Q7RTX7 472 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 PAFAH2Q99487 392 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ABCF3Q9NUQ8 709 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 TM9SF1O15321 606 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 FARP2O94887 1054 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 KCNT1Q5JUK3 1230 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 DEPDC1BQ8WUY9 529 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ZNF317Q96PQ6 595 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 TSSK1BQ9BXA7 367 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 USP18Q9UMW8 372 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 BHMG1C9JSJ3 638 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ALOX15BO15296 676 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 GH1P01241 217 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 STAG3L1P0CL83 205 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 LAMC2Q13753 1193 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 MUM1Q2TAK8 710 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 DAB2IPQ5VWQ8 1189 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 BBS12Q6ZW61 710 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ASB7Q9H672 318 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 DCTN4Q9UJW0 460 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 STARD13Q9Y3M8 1113 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 ZNF189O75820 626 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-201ENST00000287936 APOC2P02655 101 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 CXCL8P10145 99 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 KDELR1P24390 212 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 TNFSF9P41273 254 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 TMPRSS15P98073 1019 aa10.51□□□□□ -0.73
HMGCR-201ENST00000287936 PKN2Q16513 984 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms