RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 E2F5Q15329 346 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 ELMO2Q96JJ3 720 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 WWP1Q9H0M0 922 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 EPC1Q9H2F5 836 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 PPCSQ9HAB8 311 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 SMG5Q9UPR3 1016 aaKnown RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 TBKBP1A7MCY6 615 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 PSEN2P49810 448 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 PTK6Q13882 451 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 TTI2Q6NXR4 508 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 SLC27A1Q6PCB7 646 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 RRM2BQ7LG56 351 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 HS6ST3Q8IZP7 471 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 AGXT2Q9BYV1 514 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 CLCA2Q9UQC9 943 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 GAKO14976 1311 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 A0A087X0T9 212 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 POMCP01189 267 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 FAM228BP0C875 321 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 CYP11B1P15538 503 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 LINC00523Q86TU6 105 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 THAP2Q9H0W7 228 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 SNTG2Q9NY99 539 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 DISP2A7MBM2 1401 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 IRF6O14896 467 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 ZRANB3Q5FWF4 1079 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 TEDDM1Q5T9Z0 273 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 TFB1MQ8WVM0 346 aaKnown RBP19.31■□□□□ 0.68
PCDH1-201ENST00000287008 ADAM33Q9BZ11 813 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 XAB2Q9HCS7 855 aaKnown RBP19.31■□□□□ 0.68
PCDH1-201ENST00000287008 SLC12A8A0AV02 714 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 ARHGAP10A1A4S6 786 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 AKAP3O75969 853 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 SGPL1O95470 568 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 EFEMP1Q12805 493 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCDH1-201ENST00000287008 POP1Q99575 1024 aaKnown RBP19.31■□□□□ 0.68
PCDH1-201ENST00000287008 ASB7Q9H672 318 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 CYP4F11Q9HBI6 524 aa19.31■□□□□ 0.68
PCDH1-201ENST00000287008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.31■□□□□ 0.68
PCDH1-201ENST00000287008 MSCO60682 206 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 GZMAP12544 262 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 ADCYAP1R1P41586 468 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 SOX10P56693 466 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 GRAMD1AQ96CP6 724 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 PKD2L2Q9NZM6 624 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 FAM198AQ9UFP1 575 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 HPSEQ9Y251 543 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 FAM86B1E9PN63 330 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 TADA3O75528 432 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 FAM86B2P0C5J1 330 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 CHRM3P20309 590 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 PSMC6P62333 389 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 VSNL1P62760 191 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 FAM71DQ8N9W8 422 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 NDE1Q9NXR1 346 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 VPS9D1Q9Y2B5 631 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 ACKR2O00590 384 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 KDM1AO60341 852 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 MAPTP10636 758 aaKnown RBP19.3■□□□□ 0.68
PCDH1-201ENST00000287008 DEFB115Q30KQ5 88 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 SPDYAQ5MJ70 313 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 ZPBP2Q6X784 338 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 DDI1Q8WTU0 396 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 SYT15Q9BQS2 421 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 ALG13Q9NP73 1137 aaKnown RBP19.3■□□□□ 0.68
PCDH1-201ENST00000287008 PSMC3IPQ9P2W1 217 aaPredicted RBP19.3■□□□□ 0.68
PCDH1-201ENST00000287008 FZD1Q9UP38 647 aa19.3■□□□□ 0.68
PCDH1-201ENST00000287008 KRT4P19013 534 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 C3orf62Q6ZUJ4 267 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 OTOP1Q7RTM1 612 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 TMEM176AQ96HP8 235 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 TASP1Q9H6P5 420 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 ITGA11Q9UKX5 1188 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
PCDH1-201ENST00000287008 AMPD2Q01433 879 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 NOGQ13253 232 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 TRAPPC12Q8WVT3 735 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 MRPL9Q9BYD2 267 aaKnown RBP19.29■□□□□ 0.68
PCDH1-201ENST00000287008 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 CHUKO15111 745 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 DNAJC8O75937 253 aaPredicted RBP19.29■□□□□ 0.68
PCDH1-201ENST00000287008 AGTP01019 485 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 MAP2K2P36507 400 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 WASHC5Q12768 1159 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 ZNF410Q86VK4 478 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 RIOX2Q8IUF8 465 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 CNPY3Q9BT09 278 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 CHST12Q9NRB3 414 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 NR2E3Q9Y5X4 410 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 PRR23AA6NEV1 266 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 ADCY3O60266 1144 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 AXLP30530 894 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 GYS2P54840 703 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 C6orf10Q5SRN2 563 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 ITIH5Q86UX2 942 aa19.29■□□□□ 0.68
PCDH1-201ENST00000287008 MTBPQ96DY7 904 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms