RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PIP5K1AQ99755 562 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 CDADC1Q9BWV3 514 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 TBC1D14Q9P2M4 693 aa9.27□□□□□ -0.92
CTDSPL-201ENST00000273179 CCDC78A2IDD5 438 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ULK1O75385 1050 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 F2P00734 622 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 POLR2MP0CAP2 368 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 KRT3P12035 628 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 CASP14P31944 242 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 FXR1P51114 621 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 PGDP52209 483 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 PRKG2Q13237 762 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 GPR156Q8NFN8 814 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 TUBGCP2Q9BSJ2 902 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 INTS2Q9H0H0 1204 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 IARS2Q9NSE4 1012 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 STOML1Q9UBI4 398 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 DLC1Q96QB1 1528 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 A8MXQ7 604 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 KRT37O76014 449 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 APBB3O95704 486 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 APOA1P02647 267 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 KRT1P04264 644 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 RARGP13631 454 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 POLR2CP19387 275 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 TCEA1P23193 301 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 PIK3CBP42338 1070 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ARHGDIAP52565 204 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 NKX2-5P52952 324 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 RHAGQ02094 409 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 MTHFSDQ2M296 383 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 RGS21Q2M5E4 152 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 SCYL2Q6P3W7 929 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 TRMT10CQ7L0Y3 403 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 VANGL1Q8TAA9 524 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 HPS1Q92902 700 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ZSCAN31Q96LW9 406 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 FERMT1Q9BQL6 677 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 DNAJC17Q9NVM6 304 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 RNF113AO15541 343 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ECE2O60344 883 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 DNAJB6O75190 326 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 SYF2O95926 243 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 GLI1P08151 1106 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 MCF2P10911 925 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ATP1A4Q13733 1029 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 PRR16Q569H4 304 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 DRICH1Q6PGQ1 229 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 TXNDC11Q6PKC3 985 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 CLEC4FQ8N1N0 589 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 PSD4Q8NDX1 1056 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 IL17RDQ8NFM7 739 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 GANCQ8TET4 914 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 C9orf16Q9BUW7 83 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 EPC1Q9H2F5 836 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 CD93Q9NPY3 652 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 OLFML3Q9NRN5 406 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 KIAA0232Q92628 1395 aa9.27□□□□□ -0.93
CTDSPL-201ENST00000273179 MED14O60244 1454 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SBNO1A3KN83 1393 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 E2F8A0AVK6 867 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 RRN3P2A6NIE6 340 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 NOP56O00567 594 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 PDPK1O15530 556 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ADH7P40394 386 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ENPEPQ07075 957 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FAM76BQ5HYJ3 339 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KCNT1Q5JUK3 1230 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FOXR2Q6PJQ5 311 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 BLOC1S2Q6QNY1 142 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 LSMEM2Q8N112 164 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 MAGEB6Q8N7X4 407 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF606Q8WXB4 792 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ORAI2Q96SN7 254 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 COPS4Q9BT78 406 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 EMILIN2Q9BXX0 1053 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KCNF1Q9H3M0 494 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FANCEQ9HB96 536 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SARS2Q9NP81 518 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SNX7Q9UNH6 387 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SNCAIPQ9Y6H5 919 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 A0A1W2PQ72 361 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms