RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 NIPA2Q8N8Q9 360 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 APPL2Q8NEU8 664 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 SLC35F5Q8WV83 523 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 METTL5Q9NRN9 209 aaKnown RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 CCDC188H7C350 402 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 TNFRSF8P28908 595 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 RAB27AP51159 221 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 ECHDC2Q86YB7 292 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 SLC13A5Q86YT5 568 aaPredicted RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 RUBCNQ92622 972 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 PTPN22Q9Y2R2 807 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 ESYT3A0FGR9 886 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 E5RJQ4 531 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 PODXLO00592 558 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 GABRDO14764 452 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 ATP2C2O75185 946 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 HEXIM1O94992 359 aaKnown RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 UPP1Q16831 310 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 TTC27Q6P3X3 843 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 FAM183BPQ6ZVS7 135 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 EMC1Q8N766 993 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 AENQ8WTP8 325 aaKnown RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 RSAD1Q9HA92 442 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 SCN5AQ14524 2016 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 CASTOR2A6NHX0 329 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 B4GALT3O60512 393 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDE2-201ENST00000272091 LLGL1Q15334 1064 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 FAM126BQ8IXS8 530 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 SLC4A5Q9BY07 1137 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RGS18Q9NS28 235 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 SLC38A7Q9NVC3 462 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 CYB561D2O14569 222 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RGS7P49802 495 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 TCTN1Q2MV58 587 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.367e-8■■■□□ 15.5
SDE2-201ENST00000272091 C9IYK1 514 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 MAP2K7O14733 419 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 INPPL1O15357 1258 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
SDE2-201ENST00000272091 POMCP01189 267 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 TUBBP07437 444 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RARAP10276 462 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 KRT3P12035 628 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 ECHS1P30084 290 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 TAP1Q03518 808 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 PDE4CQ08493 712 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 STILQ15468 1287 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RAB6CQ53S08 254 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 KATNAL2Q8IYT4 538 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RAB6CQ9H0N0 254 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 DNM1LO00429 736 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 FSCN2O14926 492 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RPL34P49207 117 aaKnown RBP12.79□□□□□ -0.36
SDE2-201ENST00000272091 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 PAQR9Q6ZVX9 377 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 HACE1Q8IYU2 909 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.79□□□□□ -0.36
SDE2-201ENST00000272091 SENP8Q96LD8 212 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 KLHL11Q9NVR0 708 aa12.79□□□□□ -0.36
SDE2-201ENST00000272091 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 F8W810 466 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 TTI1O43156 1089 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 HUS1O60921 280 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 ACAT1P24752 427 aaKnown RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 GUCY2DQ02846 1103 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 SLC25A11Q02978 314 aaKnown RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 CYP1B1Q16678 543 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 DCUN1D2Q6PH85 259 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 OLFML1Q6UWY5 402 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 SLITRK6Q9H5Y7 841 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 EPB41L5Q9HCM4 733 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 NBNO60934 754 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 ADORA2BP29275 332 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 PTGIRP43119 386 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 TAF5Q15542 800 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 TMEM110Q86TL2 294 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 IL1R2P27930 398 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 KLF1Q13351 362 aaPredicted RBP12.78□□□□□ -0.36
SDE2-201ENST00000272091 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 CLLU1OSQ5K130 101 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms