RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TAF12Q16514 161 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 INTS6LQ5JSJ4 861 aaKnown RBP10.44□□□□□ -0.74
VPS41-201ENST00000265745 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 LMBRD2Q68DH5 695 aaPredicted RBP10.44□□□□□ -0.74
VPS41-201ENST00000265745 UNC13DQ70J99 1090 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 DPH6Q7L8W6 267 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 SUMF1Q8NBK3 374 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 ZBTB44Q8NCP5 570 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 CSGALNACT1Q8TDX6 532 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
VPS41-201ENST00000265745 HPDLQ96IR7 371 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 ANKRD36BP1Q96IX9 119 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 PI4K2AQ9BTU6 479 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 BLZF1Q9H2G9 400 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 CHRDQ9H2X0 955 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 LMAN1LQ9HAT1 526 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 ABCB6Q9NP58 842 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 ZMYM5Q9UJ78 669 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 GTF3C4Q9UKN8 822 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 PCDHGA2Q9Y5H1 932 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 TRIP11Q15643 1979 aa10.44□□□□□ -0.74
VPS41-201ENST00000265745 MYBPHLA2RUH7 354 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 SLC38A8A6NNN8 435 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 SOBPA7XYQ1 873 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 HCRTO43612 131 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 PRPF40AO75400 957 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 TNNC2P02585 160 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 LMO2P25791 158 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 PCSK1P29120 753 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 SOX9P48436 509 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 GPR15P49685 360 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 KPNA1P52294 538 aaPredicted RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 SNRPFP62306 86 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 MYO1EQ12965 1108 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 SNRNP35Q16560 246 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 DDR2Q16832 855 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 BMT2Q1RMZ1 405 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 CFAP221Q4G0U5 840 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 ARHGAP29Q52LW3 1261 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 SDHAF4Q5VUM1 108 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 C1orf228Q6PIY5 440 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 TSSK4Q6SA08 328 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 TRAPPC11Q7Z392 1133 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 WDR49Q8IV35 697 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 ADGRF2Q8IZF7 708 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 CMTM8Q8IZV2 173 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 CELF5Q8N6W0 485 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 BPIFB1Q8TDL5 484 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 ATRIPQ8WXE1 791 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 MSANTD3Q96H12 275 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 ZFYVE19Q96K21 471 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 GCNAQ96QF7 691 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 PRMT8Q9NR22 394 aaPredicted RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 PLSCR2Q9NRY7 297 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 ZSCAN32Q9NX65 697 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 FAM13BQ9NYF5 915 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 GTSE1Q9NYZ3 720 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
VPS41-201ENST00000265745 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
VPS41-201ENST00000265745 CACNA1IQ9P0X4 2223 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 COL4A3Q01955 1670 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CITO14578 2027 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 SPECC1L-ADORA2AF8WAN1 911 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CLIC2O15247 247 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
VPS41-201ENST00000265745 ATP2C2O75185 946 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 NOL4O94818 638 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CST3P01034 146 aaPredicted RBP10.42□□□□□ -0.74
VPS41-201ENST00000265745 SLFN14P0C7P3 912 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CSH1P0DML2 217 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CSH2P0DML3 217 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 DLATP10515 647 aaKnown RBP10.42□□□□□ -0.74
VPS41-201ENST00000265745 TDGF1P13385 188 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CTHP32929 405 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 AFMP43652 599 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 TNK2Q07912 1038 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CYP24A1Q07973 514 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CUL4BQ13620 913 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 GAS6Q14393 721 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 PSMD6Q15008 389 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 CCDC142Q17RM4 750 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 KNOP1Q1ED39 458 aaKnown RBP10.42□□□□□ -0.74
VPS41-201ENST00000265745 TXNDC8Q6A555 127 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 TXNDC11Q6PKC3 985 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 MON1AQ86VX9 555 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 RALGPS2Q86X27 583 aaPredicted RBP10.42□□□□□ -0.74
VPS41-201ENST00000265745 NELFCDQ8IXH7 590 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 C12orf56Q8IXR9 622 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 MAB21L3Q8N8X9 362 aa10.42□□□□□ -0.74
VPS41-201ENST00000265745 XXYLT1Q8NBI6 393 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms