RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 SOWAHAQ2M3V2 549 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 TDRD10Q5VZ19 366 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 RNF19BQ6ZMZ0 732 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 CCDC149Q6ZUS6 474 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 DPH6Q7L8W6 267 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 METTL23Q86XA0 190 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 TOP6BLQ8N6T0 577 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 OR10T2Q8NGX3 314 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 SLC7A14Q8TBB6 771 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 CCDC42Q96M95 316 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 EIF3CQ99613 913 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 PLCB1Q9NQ66 1216 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 L1RE1Q9UN81 338 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 DOCK6Q96HP0 2047 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 NOTCH4Q99466 2003 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 GTPBP10A4D1E9 387 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 LRRC53A6NM62 1247 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 GABRDO14764 452 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 CTIFO43310 598 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 SEC24AO95486 1093 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 VNN2O95498 520 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 OR4Q2P0C623 313 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 CPB1P15086 417 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 VAMP7P51809 220 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 ADCY1Q08828 1119 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 BFSP1Q12934 665 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 ZACNQ401N2 412 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 PPM1LQ5SGD2 360 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 ZNF662Q6ZS27 426 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 TMEM86AQ8N2M4 240 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 SMG7Q92540 1137 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 BAP1Q92560 729 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 TMEM209Q96SK2 561 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 XYLT2Q9H1B5 865 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 USTQ9Y2C2 406 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 SNX9Q9Y5X1 595 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 HUS1O60921 280 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 FAM163BP0C2L3 166 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 ATICP31939 592 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 SPA17Q15506 151 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 EXOC3L4Q17RC7 722 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 GBP6Q6ZN66 633 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 SV2AQ7L0J3 742 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
SGCE-201ENST00000265735 NOL4O94818 638 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 SLU7O95391 586 aaKnown RBP13.48□□□□□ -0.25
SGCE-201ENST00000265735 VNN1O95497 513 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 KRT13P13646 458 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 ELF1P32519 619 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 MYL6P60660 151 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
SGCE-201ENST00000265735 KIAA1328Q86T90 577 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 LRRTM3Q86VH5 581 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 KBTBD7Q8WVZ9 684 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■■■□ 25.3
SGCE-201ENST00000265735 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 CRACR2AQ9BSW2 395 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 CYP4F11Q9HBI6 524 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 MYO6Q9UM54 1294 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 NR2E1Q9Y466 385 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 NCOR1O75376 2440 aa13.48□□□□□ -0.25
SGCE-201ENST00000265735 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 SSU72P8A0A1W2PR75 194 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 MTMR11A4FU01 709 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 PRRG1O14668 218 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 CCL16O15467 120 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 URI1O94763 535 aaPredicted RBP13.47□□□□□ -0.25
SGCE-201ENST00000265735 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
SGCE-201ENST00000265735 LHX1P48742 406 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 PPP3CAQ08209 521 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 SMARCB1Q12824 385 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 TRPC3Q13507 836 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 NCOA4Q13772 614 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 OSTM1Q86WC4 334 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 WDR24Q96S15 920 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 GANQ9H2C0 597 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 PIDD1Q9HB75 910 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 NLRC4Q9NPP4 1024 aa13.47□□□□□ -0.25
SGCE-201ENST00000265735 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
SGCE-201ENST00000265735 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms