RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ACO1P21399 889 aaKnown RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 RFC1P35251 1148 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 CCL23P55773 120 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 MDH1BQ5I0G3 518 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 CCNI2Q6ZMN8 369 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 IFNLR1Q8IU57 520 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 LRRC57Q8N9N7 239 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 ATG4AQ8WYN0 398 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 NACA2Q9H009 215 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PCDHB7Q9Y5E2 793 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 TARSL2A2RTX5 802 aaKnown RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 MBLAC1A4D2B0 266 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 DCDC2CA8MYV0 355 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 MMP8P22894 467 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 CTGFP29279 349 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 RAB27AP51159 221 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PDCLQ13371 301 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 DCAF6Q58WW2 860 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 SCARA3Q6AZY7 606 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 LRRC52Q8N7C0 313 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 MRRFQ96E11 262 aaKnown RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 TWNKQ96RR1 684 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 FMO2Q99518 471 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 XYLT2Q9H1B5 865 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 DHX35Q9H5Z1 703 aaKnown RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 ATP11BQ9Y2G3 1177 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 AP1G2O75843 785 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 FAM200BP0CF97 657 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 UNGP13051 313 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 CLDN10P78369 228 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PTPN20Q4JDL3 420 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 CAPN12Q6ZSI9 719 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PHF13Q86YI8 300 aaPredicted RBP9.81□□□□□ -0.84
SSR3-201ENST00000265044 CPNE8Q86YQ8 564 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 SLC4A11Q8NBS3 891 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 RXFP2Q8WXD0 754 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 HES6Q96HZ4 224 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
SSR3-201ENST00000265044 TRAPPC3O43617 180 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 GLI1P08151 1106 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 H2AFXP16104 143 aaPredicted RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 GPD1P21695 349 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 BCAT1P54687 386 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 MAP3K7CLP57077 242 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 IRF5Q13568 498 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 CEP85LQ5SZL2 805 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 C3orf20Q8ND61 904 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 TMEM174Q8WUU8 243 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 HHIPL1Q96JK4 782 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 CPXM1Q96SM3 734 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 CHST12Q9NRB3 414 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 TTC7AQ9ULT0 858 aaPredicted RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 E7EVH7 732 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 MCF2LO15068 1137 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 ODC1P11926 461 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 CPB1P15086 417 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 MAN1A1P33908 653 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 GRIK1P39086 918 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 ARL4AP40617 200 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 LMNB2Q03252 620 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 DPY19L2P1Q6NXN4 242 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 EMBQ6PCB8 327 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 RCOR2Q8IZ40 523 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 AGO3Q9H9G7 860 aaKnown RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 DERAQ9Y315 318 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 TTLL3Q9Y4R7 772 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 PCDHA3Q9Y5H8 950 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 HPDP32754 393 aaPredicted RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 LILRA4P59901 499 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 CUL1Q13616 776 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 KRT71Q3SY84 523 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 DARS2Q6PI48 645 aaKnown RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 ZC3H18Q86VM9 953 aaKnown RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 SPATA2LQ8IUW3 424 aaPredicted RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 DDX1Q92499 740 aaKnown RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 USP6NLQ92738 828 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 RUNDC3BQ96NL0 473 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 SYT15Q9BQS2 421 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 DDX56Q9NY93 547 aaKnown RBP9.8□□□□□ -0.84
SSR3-201ENST00000265044 LCMT1Q9UIC8 334 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 STAP1Q9ULZ2 295 aa9.8□□□□□ -0.84
SSR3-201ENST00000265044 LOXHD1Q8IVV2 1947 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ERICH4A6NGS2 130 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 CREB3O43889 395 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 PHF2O75151 1096 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 CYP1A1P04798 512 aaPredicted RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 CLCNKBP51801 687 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 BST2Q10589 180 aaKnown RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 KCTD16Q68DU8 428 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 MON1BQ7L1V2 547 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 SEPT8Q92599 483 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 SDCBP2Q9H190 292 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 FAM204AQ9H8W3 233 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms