RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 UIMC1Q96RL1 719 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 MAK16Q9BXY0 300 aaKnown RBP13.76□□□□□ -0.21
NUP54-201ENST00000264883 WDR11Q9BZH6 1224 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 KCNK13Q9HB14 408 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 INIPQ9NRY2 104 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 TBCCD1Q9NVR7 557 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 ARMCX1Q9P291 453 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 SYNPO2Q9UMS6 1093 aa13.76□□□□□ -0.21
NUP54-201ENST00000264883 SOCS7O14512 581 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 TXNDC9O14530 226 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 LRRN2O75325 713 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 SLITRK3O94933 977 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 SMIM18P0DKX4 95 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 KRT4P19013 534 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 DLG1Q12959 904 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 MSLNQ13421 630 aaPredicted RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 RASA2Q15283 850 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 HSP90AA5PQ58FG0 334 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 ODR4Q5SWX8 454 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 MAP3K21Q5TCX8 1036 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 UGT2A3Q6UWM9 527 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 ZBED8Q8IZ13 594 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 RBM15BQ8NDT2 890 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 MTBPQ96DY7 904 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 THTPAQ9BU02 230 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 ADAM33Q9BZ11 813 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 KLHL4Q9C0H6 718 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 SAYSD1Q9NPB0 183 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 SLC7A8Q9UHI5 535 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 IGLV3-22A0A075B6J6 115 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 BOLA2-SMG1P6H3BVE0 249 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 ATMINO43313 823 aaPredicted RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 AP1G1O43747 822 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 PSMD10O75832 226 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 VAMP7P51809 220 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 AQP4P55087 323 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 GEMIN4P57678 1058 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 SLC25A41Q8N5S1 370 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 GMLQ99445 158 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 P2RX7Q99572 595 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 NUP85Q9BW27 656 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 RANBP17Q9H2T7 1088 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 SPATA7Q9P0W8 599 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
NUP54-201ENST00000264883 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
NUP54-201ENST00000264883 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 CLPTM1O96005 669 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 ARL4CP56559 192 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 XIAPP98170 497 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 CENPCQ03188 943 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 NFIAQ12857 509 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 COG2Q14746 738 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 DALRD3Q5D0E6 543 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 AAGABQ6PD74 315 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 KLHL35Q6PF15 583 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 FAM71AQ8IYT1 594 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 NUP93Q8N1F7 819 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 LARGE2Q8N3Y3 721 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ZNF276Q8N554 614 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 FNDC8Q8TC99 324 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 EPS8L1Q8TE68 723 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 C17orf50Q8WW18 174 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 HSPBAP1Q96EW2 488 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 S100A14Q9HCY8 104 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 FAIMQ9NVQ4 179 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 PLA2G4CQ9UP65 541 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 C15orf38-AP3S2A0A0A6YYH1 394 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 TFAP2AP05549 437 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 MFAP3P55082 362 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 NADK2Q4G0N4 442 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 FAM91A1Q658Y4 838 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 ARPINQ7Z6K5 226 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms