RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MAGEA11P43364 429 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 NLRP12P59046 1061 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 NUCB2P80303 420 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 CYP4F8P98187 520 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 MAPRE1Q15691 268 aaKnown RBP17.2■□□□□ 0.34
USE1-201ENST00000263897 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 YAF2Q8IY57 180 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 MRPL45Q9BRJ2 306 aaKnown RBP17.2■□□□□ 0.34
USE1-201ENST00000263897 XYLT2Q9H1B5 865 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 CRTAC1Q9NQ79 661 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
USE1-201ENST00000263897 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 MRPS17Q9Y2R5 130 aaKnown RBP17.2■□□□□ 0.34
USE1-201ENST00000263897 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 SOBPA7XYQ1 873 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 ARNTLO00327 626 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 MAN2B1O00754 1011 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 CHADO15335 359 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 NCAM2O15394 837 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 CALUO43852 315 aaPredicted RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 MLLT6P55198 1093 aaPredicted RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 TNNC1P63316 161 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 FZD5Q13467 585 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 KCNB1Q14721 858 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 C1orf210Q8IVY1 113 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 TMC2Q8TDI7 906 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 CLDN23Q96B33 292 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 TRMT2BQ96GJ1 504 aaKnown RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 MYRFLQ96LU7 910 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 BCO2Q9BYV7 579 aa17.19■□□□□ 0.34
USE1-201ENST00000263897 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
USE1-201ENST00000263897 NOL4O94818 638 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 TARSP26639 723 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 PSMC1P62191 440 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 DLG4P78352 724 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 BIRC3Q13489 604 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 VSTM1Q6UX27 236 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 CMTM8Q8IZV2 173 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 STKLD1Q8NE28 680 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 OR6B3Q8NGW1 331 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 MYCBPAPQ8TBZ2 947 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 FRMD4BQ9Y2L6 1034 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 NME7Q9Y5B8 376 aa17.18■□□□□ 0.34
USE1-201ENST00000263897 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
USE1-201ENST00000263897 TICRRQ7Z2Z1 1910 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
USE1-201ENST00000263897 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 IKBKBO14920 756 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 VNN1O95497 513 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 PTPN1P18031 435 aaKnown RBP17.17■□□□□ 0.34
USE1-201ENST00000263897 DDX6P26196 483 aaKnown RBP eCLIP17.17■□□□□ 0.34
USE1-201ENST00000263897 MAGEA9P43362 315 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 RPS9P46781 194 aaKnown RBP17.17■□□□□ 0.34
USE1-201ENST00000263897 NFIL3Q16649 462 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 ARHGAP29Q52LW3 1261 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 TXNDC8Q6A555 127 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 MON1AQ86VX9 555 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 FMR1NBQ8N0W7 255 aaPredicted RBP17.17■□□□□ 0.34
USE1-201ENST00000263897 ZNF687Q8N1G0 1237 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 BPIFB1Q8TDL5 484 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 CSGALNACT1Q8TDX6 532 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 MRPS31Q92665 395 aaKnown RBP17.17■□□□□ 0.34
USE1-201ENST00000263897 MYLPFQ96A32 169 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 PIAS3Q9Y6X2 628 aa17.17■□□□□ 0.34
USE1-201ENST00000263897 FAM186AA6NE01 2351 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 MAPK13O15264 365 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 BDNFP23560 247 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 AVPR1AP37288 418 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 NCOA4Q13772 614 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 SGSM1Q2NKQ1 1148 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 ZACNQ401N2 412 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 ZNF667Q5HYK9 610 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 MDH1BQ5I0G3 518 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 SV2AQ7L0J3 742 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 MAML2Q8IZL2 1156 aaPredicted RBP17.16■□□□□ 0.34
USE1-201ENST00000263897 FAM3CQ92520 227 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 PCED1BQ96HM7 432 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 SPATA17Q96L03 361 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 CEP295NLQ96MC4 621 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms