RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 C1orf131Q8NDD1 294 aaKnown RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TNIP3Q96KP6 325 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 C17orf80Q9BSJ5 609 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 MED10Q9BTT4 135 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TTPALQ9BTX7 342 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 B3GNT5Q9BYG0 378 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 FAM124BQ9H5Z6 455 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TJP2Q9UDY2 1190 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 DSEQ9UL01 958 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 CDH9Q9ULB4 789 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 MYO7AQ13402 2215 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PIK3R2O00459 728 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 SYN3O14994 580 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ADAM12O43184 909 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 MED7O43513 233 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 RTN2O75298 545 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 BEST1O76090 585 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 FGF18O76093 207 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 OAZ2O95190 189 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 CCDC175P0C221 793 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PAX3P23760 479 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ARHGAP25P42331 645 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 GALCP54803 685 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 NOMO3P69849 1222 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 MRPL58Q14197 206 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 CTXN3Q4LDR2 81 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 SLC39A12Q504Y0 691 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 INTS6LQ5JSJ4 861 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ACAD10Q6JQN1 1059 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 LCLAT1Q6UWP7 414 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 KIAA1328Q86T90 577 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 FUKQ8N0W3 1084 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 CLP1Q92989 425 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 MYLPFQ96A32 169 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PCED1BQ96HM7 432 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PKMYT1Q99640 499 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ACBD6Q9BR61 282 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ZNF518BQ9C0D4 1074 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 ALG13Q9NP73 1137 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 LZTFL1Q9NQ48 299 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 TMEM30AQ9NV96 361 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 KIAA1257Q9ULG3 409 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 YBX2Q9Y2T7 364 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 PCDHB12Q9Y5F1 795 aa10.32□□□□□ -0.76
SNRNP40-201ENST00000263694 IPO7O95373 1038 aaKnown RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CA3P07451 260 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 GZMAP12544 262 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 DNAJB2P25686 324 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ANXA13P27216 316 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PCSK1P29120 753 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CTNNB1P35222 781 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 BMPR1AP36894 532 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 GPD2P43304 727 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 RGS7P49802 495 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 VAV2P52735 878 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CACNA2D1P54289 1103 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 KRT83P78385 493 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PDE4CQ08493 712 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ARHGAP17Q68EM7 881 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 KIAA1841Q6NSI8 718 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 FAM171BQ6P995 826 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MMS22LQ6ZRQ5 1243 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 DDX53Q86TM3 631 aaKnown RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MYCBPAPQ8TBZ2 947 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ARHGEF26Q96DR7 871 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PPP1R13BQ96KQ4 1090 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PGLYRP2Q96PD5 576 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 C11orf70Q9BRQ4 267 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 IRX2Q9BZI1 471 aaPredicted RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 THAP2Q9H0W7 228 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ISCUQ9H1K1 167 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CERS4Q9HA82 394 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 AAASQ9NRG9 546 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 SALL4Q9UJQ4 1053 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PTPRDP23468 1912 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MYO9BQ13459 2157 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ARHGEF37A1IGU5 675 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ESPNB1AK53 854 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 TBC1D4O60343 1298 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 GJB6O95452 261 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 SOD2P04179 222 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 H2AFZP0C0S5 128 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 BDNFP23560 247 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 MSNP26038 577 aaKnown RBP10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 TSPY1Q01534 308 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CENPCQ03188 943 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 CYP4A22Q5TCH4 519 aa10.31□□□□□ -0.76
SNRNP40-201ENST00000263694 ZNF280DQ6N043 979 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms