RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 GALNT6Q8NCL4 622 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 A6NL46 340 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 K7EPI3 171 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 LPXNO60711 386 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 MAGP20916 626 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SIX6OS1Q8N1H7 587 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 PPP4R1Q8TF05 950 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SLC13A1Q9BZW2 595 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SAR1AQ9NR31 198 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SACM1LQ9NTJ5 587 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 MYH10P35580 1976 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 PFASO15067 1338 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ZBTB5O15062 677 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 IDH3BO43837 385 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 CCNB1P14635 433 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 HSPA6P17066 643 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ATF4P18848 351 aaPredicted RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 MAGEA4P43358 317 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 GALCP54803 685 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ANTXR2P58335 489 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 SULT2A1Q06520 285 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ITPK1Q13572 414 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 NEDD8Q15843 81 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 CENPSQ8N2Z9 138 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 GRK7Q8WTQ7 553 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 TBATAQ96M53 351 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 FAM193BQ96PV7 902 aaPredicted RBP13.53□□□□□ -0.24
TMEM260-201ENST00000261556 PPP1R16BQ96T49 567 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
TMEM260-201ENST00000261556 ADGRB3O60242 1522 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 USP17L10C9JJH3 530 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 PHF2O75151 1096 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 CAMTA2O94983 1202 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 CYP1A1P04798 512 aaPredicted RBP13.52□□□□□ -0.24
TMEM260-201ENST00000261556 GSSP48637 474 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 AAGABQ6PD74 315 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 ZBED8Q8IZ13 594 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 NRBF2Q96F24 287 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 NT5C1BQ96P26 610 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 TLK1Q9UKI8 766 aa13.52□□□□□ -0.24
TMEM260-201ENST00000261556 ZNF839A8K0R7 811 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF862O60290 1169 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 NKX2-5P52952 324 aaPredicted RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 ITGA8P53708 1063 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 OSTNP61366 133 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 DAB2P98082 770 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 NSUN2Q08J23 767 aaKnown RBP eCLIP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 STAT4Q14765 748 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 FXNQ16595 210 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 AADACL2Q6P093 401 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 AGR3Q8TD06 166 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 PYROXD1Q8WU10 500 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 RAVER2Q9HCJ3 691 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 PPM1HQ9ULR3 514 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 AP4B1Q9Y6B7 739 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 FUOMA2VDF0 154 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 AGRPO00253 132 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 AIM2O14862 343 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 RCVRNP35243 200 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 LRRC63Q05C16 580 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 TFDP1Q14186 410 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 GALNTL6Q49A17 601 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 PDCD6IPQ8WUM4 868 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 MRPS26Q9BYN8 205 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 WWP1Q9H0M0 922 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 PARVGQ9HBI0 331 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms