RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 RESP18Q5W5W9 173 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 TRAPPC11Q7Z392 1133 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 WDR49Q8IV35 697 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 SCN4BQ8IWT1 228 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 CELF5Q8N6W0 485 aaKnown RBP20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 KBTBD7Q8WVZ9 684 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 RUBCNQ92622 972 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 NELL1Q92832 810 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 USP13Q92995 863 aaPredicted RBP20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 KIAA1586Q9HCI6 787 aa20.38■□□□□ 0.85
TM6SF1-201ENST00000258909 CEP250Q9BV73 2442 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 CST3P01034 146 aaPredicted RBP20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 PDGFRBP09619 1106 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 TNNI1P19237 187 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 PCSK1P29120 753 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 RPL10AP62906 217 aaKnown RBP20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 SATB1Q01826 763 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 PON2Q15165 354 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 Q6ZS52 159 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 MRPS31Q92665 395 aaKnown RBP20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 MMS19Q96T76 1030 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 ABCB6Q9NP58 842 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 GKN1Q9NS71 199 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 TADA3O75528 432 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 TDGF1P13385 188 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 ID4P47928 161 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 TRIM68Q6AZZ1 485 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 RALGPS2Q86X27 583 aaPredicted RBP20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 XXYLT1Q8NBI6 393 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 TTC16Q8NEE8 873 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 RIN3Q8TB24 985 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 MSANTD3Q96H12 275 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 SYT15Q9BQS2 421 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 MAGEF1Q9HAY2 307 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 CRTAC1Q9NQ79 661 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 THG1LQ9NWX6 298 aaKnown RBP20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 SERTAD1Q9UHV2 236 aa20.37■□□□□ 0.85
TM6SF1-201ENST00000258909 DNAH14Q0VDD8 3507 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 LILRB5O75023 590 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 NOL4O94818 638 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CXCL12P48061 93 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CCR3P51677 355 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 PLCB2Q00722 1185 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CYP24A1Q07973 514 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 ITPRIPL2Q3MIP1 535 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CFAP221Q4G0U5 840 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 FAM171BQ6P995 826 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 DPH6Q7L8W6 267 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 LIMS2Q7Z4I7 341 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 MON1AQ86VX9 555 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 SPATA18Q8TC71 538 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 MYLPFQ96A32 169 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 FNBP1Q96RU3 617 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CYP2S1Q96SQ9 504 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 MRPL45Q9BRJ2 306 aaKnown RBP20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 TRPC7Q9HCX4 862 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 TDP1Q9NUW8 608 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 CFAP45Q9UL16 551 aa20.36■□□□□ 0.85
TM6SF1-201ENST00000258909 UBE4BO95155 1302 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 ATG2BQ96BY7 2078 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 PDIA4P13667 645 aaKnown RBP20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 LRRC32Q14392 662 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 PSMD6Q15008 389 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 C1orf228Q6PIY5 440 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 MAMSTRQ6ZN01 415 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 HS2ST1Q7LGA3 356 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 ZNF516Q92618 1163 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 CGRRF1Q99675 332 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 FAM83CQ9BQN1 747 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 IER2Q9BTL4 223 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 EBF3Q9H4W6 596 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 HPS4Q9NQG7 708 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 C2orf42Q9NWW7 574 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 NCDNQ9UBB6 729 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 CDH9Q9ULB4 789 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 SMG5Q9UPR3 1016 aaKnown RBP20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 NME7Q9Y5B8 376 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 GREB1Q4ZG55 1949 aa20.35■□□□□ 0.85
TM6SF1-201ENST00000258909 ANAPC1Q9H1A4 1944 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 OTOL1A6NHN0 477 aaPredicted RBP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 WARSP23381 471 aaKnown RBP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 BDNFP23560 247 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 DDX6P26196 483 aaKnown RBP eCLIP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 HOXC13P31276 330 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 CASP4P49662 377 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 CYP27A1Q02318 531 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 DMWDQ09019 674 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 CEP57L1Q8IYX8 460 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 TRMT2BQ96GJ1 504 aaKnown RBP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 FUBP3Q96I24 572 aaKnown RBP eCLIP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 MYRFLQ96LU7 910 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 SLC22A12Q96S37 553 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 EPC1Q9H2F5 836 aa20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 UXTQ9UBK9 157 aaPredicted RBP20.34■□□□□ 0.85
TM6SF1-201ENST00000258909 ZMYM5Q9UJ78 669 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms