RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 CTAGE8P0CG41 777 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
NIP7-201ENST00000254940 NDST1P52848 882 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
NIP7-201ENST00000254940 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 CTAGE6Q86UF2 777 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 CTAGE4Q8IX94 777 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 SLC39A11Q8N1S5 342 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
NIP7-201ENST00000254940 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
NIP7-201ENST00000254940 XIRP2A4UGR9 3374 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.85□□□□□ -0.35
NIP7-201ENST00000254940 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.85□□□□□ -0.35
NIP7-201ENST00000254940 GRM6O15303 877 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 FERP16591 822 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 CBX1P83916 185 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 LRRC52Q8N7C0 313 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
NIP7-201ENST00000254940 LRCH3Q96II8 777 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 SPG21Q9NZD8 308 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
NIP7-201ENST00000254940 A8MXQ7 604 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 CD19P15391 556 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 LAG3P18627 525 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 IRS1P35568 1242 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 ERVFC1P60507 584 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 DAB2IPQ5VWQ8 1189 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 PLPP4Q5VZY2 271 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 KIAA1841Q6NSI8 718 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 MICAL1Q8TDZ2 1067 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 BTBD6Q96KE9 485 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 COG5Q9UP83 839 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 CLDN5O00501 218 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 P4HA2O15460 535 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 GJB6O95452 261 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 ACO1P21399 889 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 BMPR1AP36894 532 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 GNL1P36915 607 aaPredicted RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 WHAMMP3Q1A5X7 153 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 RBM23Q86U06 439 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 SLC35G2Q8TBE7 412 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 EPS8L1Q8TE68 723 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 ZSWIM1Q9BR11 485 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 NOCTQ9UK39 431 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
NIP7-201ENST00000254940 TSC2P49815 1807 aa12.84□□□□□ -0.35
NIP7-201ENST00000254940 PIK3R2O00459 728 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 SOAT2O75908 522 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 CCDC130P13994 396 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 TNFAIP3P21580 790 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 MFAP3P55082 362 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 VSNL1P62760 191 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 OVOS1Q6IE37 1185 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 GSPT2Q8IYD1 628 aaKnown RBP12.83□□□□□ -0.35
NIP7-201ENST00000254940 RBBP8NLQ8NC74 664 aaPredicted RBP12.83□□□□□ -0.35
NIP7-201ENST00000254940 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.35
NIP7-201ENST00000254940 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.35
NIP7-201ENST00000254940 UROC1Q96N76 676 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 AGPAT1Q99943 283 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 TRIM7Q9C029 511 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 TMLHEQ9NVH6 421 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.35
NIP7-201ENST00000254940 SF3B1O75533 1304 aaKnown RBP eCLIP12.83□□□□□ -0.36
NIP7-201ENST00000254940 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 PER2O15055 1255 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 ODC1P11926 461 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 ADORA2BP29275 332 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 ATICP31939 592 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 TTC9BQ8N6N2 239 aa12.83□□□□□ -0.36
NIP7-201ENST00000254940 POF1BQ8WVV4 589 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms