RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SLC4A11Q8NBS3 891 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 NFKBIZQ9BYH8 718 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 ZWILCHQ9H900 591 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 CNOT10Q9H9A5 744 aaKnown RBP19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 AGTP01019 485 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 PSMA2P25787 234 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 SLC10A6Q3KNW5 377 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 B4GALNT4Q76KP1 1039 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 DPH6Q7L8W6 267 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 KIAA0319LQ8IZA0 1049 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 PPP1R13LQ8WUF5 828 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 NINJ2Q9NZG7 142 aa19.72■□□□□ 0.75
PDLIM4-201ENST00000253754 SRRM3A6NNA2 597 aaPredicted RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 TTC4O95801 387 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 ERBB2P04626 1255 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 IL1R2P27930 398 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 POLR2BP30876 1174 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 PSMC1P62191 440 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 NOGQ13253 232 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 PIGHQ14442 188 aaPredicted RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 CCDC89Q8N998 374 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 NLRP7Q8WX94 980 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 XPO6Q96QU8 1125 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 RASSF4Q9H2L5 321 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 SAE1Q9UBE0 346 aaPredicted RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 ZNF148Q9UQR1 794 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 GNEQ9Y223 722 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 hCG_1818297A0A087WSY0 165 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 MCF2P10911 925 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 KRT3P12035 628 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 CDKN2BP42772 138 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 YWHAEP62258 255 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 TNFAIP8L3Q5GJ75 292 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 ERMARDQ5T6L9 678 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 LRRC38Q5VT99 294 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 ATXN2LQ8WWM7 1075 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 C9orf72Q96LT7 481 aa19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 DDX20Q9UHI6 824 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-201ENST00000253754 TJP3O95049 919 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 CREB1P16220 341 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 CETN2P41208 172 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 LIG3P49916 1009 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 DYNLT1P63172 113 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 FAM187BQ17R55 369 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 MTHFD1LQ6UB35 978 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 TLK2Q86UE8 772 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 CXCL16Q9H2A7 254 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 C10orf88Q9H8K7 445 aa19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 METTL5Q9NRN9 209 aaKnown RBP19.7■□□□□ 0.74
PDLIM4-201ENST00000253754 ZSWIM8A7E2V4 1837 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 PIK3R2O00459 728 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 CILPO75339 1184 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 LRCH4O75427 683 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 ALDH1A1P00352 501 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 HOXD8P13378 290 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 MAGEA9P43362 315 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 VEGFBP49765 207 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 SLC25A11Q02978 314 aaKnown RBP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 PTPN11Q06124 597 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 EXOC3L1Q86VI1 746 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 NIPA2Q8N8Q9 360 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 LHX5Q9H2C1 402 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 SYNCQ9H7C4 482 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 STRIP2Q9ULQ0 834 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 C3orf70A6NLC5 250 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 MED7O43513 233 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 MICAL2O94851 1124 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 FCGRTP55899 365 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 CAV1Q03135 178 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 TAP1Q03518 808 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 SF3A3Q12874 501 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 TFDP3Q5H9I0 405 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 MFSD5Q6N075 450 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 HIBCHQ6NVY1 386 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 XYLT1Q86Y38 959 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 AGAP1Q9UPQ3 857 aa19.69■□□□□ 0.74
PDLIM4-201ENST00000253754 A6NJR5 290 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 SIGLEC16A6NMB1 481 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 M0QYV0 167 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 TSPAN1O60635 241 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 ARSEP51690 589 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 UBA3Q8TBC4 463 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 TMEM176AQ96HP8 235 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 HPDLQ96IR7 371 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 TMEM121Q9BTD3 319 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 MAGEB2O15479 319 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 CD48P09326 243 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 DRD4P21917 467 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 TMEM62Q0P6H9 643 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 IFT88Q13099 833 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 IRF5Q13568 498 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 TMEM132DQ14C87 1099 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 HP1BP3Q5SSJ5 553 aaPredicted RBP19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 MARCH8Q5T0T0 291 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 ALLCQ8N6M5 410 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 PRMT1Q99873 361 aaKnown RBP19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 PCSK1NQ9UHG2 260 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 GINS2Q9Y248 185 aa19.68■□□□□ 0.74
PDLIM4-201ENST00000253754 IFNAR2P48551 515 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms