RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ASTE1Q2TB18 679 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 DACT2Q5SW24 774 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ATF7IP2Q5U623 682 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 DSTYKQ6XUX3 929 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 YTHDF3Q7Z739 585 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SYTL5Q8TDW5 730 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 EPS8L1Q8TE68 723 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 AVENQ9NQS1 362 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FAM198AQ9UFP1 575 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 VAV3Q9UKW4 847 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ZNRF3Q9ULT6 936 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ZBTB7AO95365 584 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 MYL2P10916 166 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 AQP5P55064 265 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NME3Q13232 169 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TMEM132DQ14C87 1099 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TMEM259Q4ZIN3 620 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 RWDD4Q6NW29 188 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 C16orf46Q6P387 395 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 LRRC6Q86X45 466 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SLC25A41Q8N5S1 370 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SLC24A2Q9UI40 661 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PSTPIP1O43586 416 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 KRT16P08779 473 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PECAM1P16284 738 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FASTKD1Q53R41 847 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TMC2Q8TDI7 906 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NAF1Q96HR8 494 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 GCOM2Q9BZD3 368 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PAK5Q9P286 719 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PABPN1LA6NDY0 278 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ATP9BO43861 1147 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 OATP04181 439 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SUPT20HL2P0C7V6 817 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 BGNP21810 368 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CACNA2D1P54289 1103 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 RBP5P82980 135 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 MYBPC2Q14324 1141 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 EXOC3L1Q86VI1 746 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 WWP1Q9H0M0 922 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 YY1AP1Q9H869 796 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 POLIQ9UNA4 740 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 LOC100653049A0A140TA62 436 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 KRT34O76011 436 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 GPD1P21695 349 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 OCRLQ01968 901 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ANKRD20A4Q4UJ75 823 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ANKRD20A2Q5SQ80 823 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ANKRD20A1Q5TYW2 823 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ZNF572Q7Z3I7 529 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FAM71AQ8IYT1 594 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 POU5F2Q8N7G0 328 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 OR6P1Q8NGX9 317 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 LRRN4Q8WUT4 740 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 MX2P20592 715 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 HOXA10P31260 410 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FOXN2P32314 431 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 KRT80Q6KB66 452 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ISLR2Q6UXK2 745 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TSR3Q9UJK0 312 aaKnown RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 CDK5RAP2Q96SN8 1893 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 MEI4A8MW99 385 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 RBAK-RBAKDNI3L0D1 243 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 VHLP40337 213 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 KDELC2Q7Z4H8 507 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ABRAQ8N0Z2 381 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 CGRRF1Q99675 332 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 RSAD1Q9HA92 442 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 EPS15L1Q9UBC2 864 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 GOLGA8QA0A0J9YX86 632 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 GOLGA8OA6NCC3 632 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 GOLGA8NF8WBI6 632 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ENTPD5O75356 428 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 RPL10AP62906 217 aaKnown RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FOXD4Q12950 439 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ZNF677Q86XU0 584 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TEX9Q8N6V9 391 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FBXO36Q8NEA4 188 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 GMCL1P1Q8NEA9 526 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 BEST2Q8NFU1 509 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 LPAR1Q92633 364 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FHDC1Q9C0D6 1143 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 C2orf40Q9H1Z8 148 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 DONSONQ9NYP3 566 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 COG5Q9UP83 839 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 KRT36O76013 467 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 CYP3A4P08684 503 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 EFTUD2Q15029 972 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 MTFR1Q15390 333 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TAF12Q16514 161 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 BMT2Q1RMZ1 405 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ACOT1Q86TX2 421 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TRIML2Q8N7C3 387 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 SPOCK2Q92563 424 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TMA16Q96EY4 203 aaKnown RBP4.81□□□□□ -1.64
VPS13C-201ENST00000249837 ARL8BQ9NVJ2 186 aa4.81□□□□□ -1.64
VPS13C-201ENST00000249837 TMX2Q9Y320 296 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms