RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 KRT17Q04695 432 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 ARHGAP29Q52LW3 1261 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 FAM171A1Q5VUB5 890 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 ZNF280DQ6N043 979 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 DDX53Q86TM3 631 aaKnown RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 OSTM1Q86WC4 334 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 ACRBPQ8NEB7 543 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 PIK3R5Q8WYR1 880 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 TMEM169Q96HH4 297 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.21
LSM8-201ENST00000249299 PPP1R13BQ96KQ4 1090 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 HSFY1Q96LI6 401 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 SAMD11Q96NU1 681 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 RTP3Q9BQQ7 232 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 ZSWIM1Q9BR11 485 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 DESI2Q9BSY9 194 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 GPR62Q9BZJ7 368 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 PNPLA8Q9NP80 782 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 NME7Q9Y5B8 376 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 TLL1O43897 1013 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 MICAL2O94851 1124 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 SOD2P04179 222 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 CALB1P05937 261 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 RB1P06400 928 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 MMP8P22894 467 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 MAGEA10P43363 369 aaPredicted RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 GABRB2P47870 512 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 RPL34P49207 117 aaKnown RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 GALCP54803 685 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 HADHBP55084 474 aaKnown RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 GPC5P78333 572 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 PPP1R26Q5T8A7 1209 aaPredicted RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 RABGGTAQ92696 567 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 CEP295NLQ96MC4 621 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 ZCWPW1Q9H0M4 648 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 ABCB6Q9NP58 842 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 UVRAGQ9P2Y5 699 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 TSPAN16Q9UKR8 245 aa13.7□□□□□ -0.22
LSM8-201ENST00000249299 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
LSM8-201ENST00000249299 MTA2O94776 668 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 CYP1A2P05177 515 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 LINC00271P0C7V0 271 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
LSM8-201ENST00000249299 BMP8BP34820 402 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 ACADSBP45954 432 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 FOXK1P85037 733 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 TAP1Q03518 808 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 UBE3AQ05086 875 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 LIN9Q5TKA1 542 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 ZDHHC17Q8IUH5 632 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 FUKQ8N0W3 1084 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 C12orf29Q8N999 325 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 SLC35F5Q8WV83 523 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 RFFLQ8WZ73 363 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 GDF15Q99988 308 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 DUSP16Q9BY84 665 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 DPEP3Q9H4B8 488 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
LSM8-201ENST00000249299 CRTAC1Q9NQ79 661 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■□□□□ 8.1
LSM8-201ENST00000249299 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 TIMM13Q9Y5L4 95 aaPredicted RBP13.69□□□□□ -0.22
LSM8-201ENST00000249299 NCANO14594 1321 aa13.69□□□□□ -0.22
LSM8-201ENST00000249299 C5orf67F2Z3F1 127 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 F8W810 466 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 I3L4J1 428 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 M0QYV0 167 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
LSM8-201ENST00000249299 KIF5CO60282 957 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 C1RP00736 705 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 NPR3P17342 541 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 SCNN1AP37088 669 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms