RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CPXM1Q96SM3 734 aa24.68■■□□□ 1.54
SYNGR3-201ENST00000248121 IP6K2Q9UHH9 426 aa24.68■■□□□ 1.54
SYNGR3-201ENST00000248121 SPTLC1O15269 473 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 PSTPIP1O43586 416 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 CYP3A5P20815 502 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 CHRNA3P32297 505 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 GPS2Q13227 327 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 RTN4RL1Q86UN2 441 aaPredicted RBP24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 ZNF333Q96JL9 665 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 ACBD3Q9H3P7 528 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 PCYOX1Q9UHG3 505 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 USTQ9Y2C2 406 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 NME7Q9Y5B8 376 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 TANC1Q9C0D5 1861 aa24.67■■□□□ 1.54
SYNGR3-201ENST00000248121 CAND2O75155 1236 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 GGCXP38435 758 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 DHX34Q14147 1143 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 JAMLQ86YT9 394 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 RHOT1Q8IXI2 618 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 RIN2Q8WYP3 895 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 VDRP11473 427 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 MYO1EQ12965 1108 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 HLTFQ14527 1009 aaKnown RBP eCLIP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 CNGA2Q16280 664 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 DUPD1Q68J44 220 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 LRRC8DQ7L1W4 858 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 ANKS1BQ7Z6G8 1248 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 MREGQ8N565 214 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 HEXIM2Q96MH2 286 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 DPH5Q9H2P9 285 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 UTP11Q9Y3A2 253 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 SNX9Q9Y5X1 595 aa24.66■■□□□ 1.54
SYNGR3-201ENST00000248121 FAM187AA6NFU0 413 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 F8VP50 259 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 PIRO00625 290 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 GPD2P43304 727 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 SCNN1GP51170 649 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 LBX1P52954 281 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 GABPB1Q06547 395 aaPredicted RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 CTU1Q7Z7A3 348 aaKnown RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 C12orf50Q8NA57 414 aaPredicted RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 MRPL45Q9BRJ2 306 aaKnown RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 FAM124BQ9H5Z6 455 aaPredicted RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 PRDM10Q9NQV6 1147 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 PCDH10Q9P2E7 1040 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 ARL5CA6NH57 179 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 HCRTO43612 131 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 NBNO60934 754 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 ERBB2P04626 1255 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 DCUN1D2Q6PH85 259 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 CCDC137Q6PK04 289 aaKnown RBP24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 KATNAL2Q8IYT4 538 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 ERP44Q9BS26 406 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 PLVAPQ9BX97 442 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 CRISPLD2Q9H0B8 497 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 MED4Q9NPJ6 270 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 MTUS1Q9ULD2 1270 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 STRIP2Q9ULQ0 834 aa24.65■■□□□ 1.54
SYNGR3-201ENST00000248121 A0A0U1RQF3 1178 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 GOLGA6BA6NDN3 693 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 M0QYV0 167 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 COILP38432 576 aaPredicted RBP24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 ATP13A4Q4VNC1 1196 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 MRPL10Q7Z7H8 261 aaKnown RBP24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 XYLT1Q86Y38 959 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 LRRC52Q8N7C0 313 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 TRIM31Q9BZY9 425 aa24.64■■□□□ 1.53
SYNGR3-201ENST00000248121 FLT3P36888 993 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 GYS2P54840 703 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 GSCP56915 257 aaPredicted RBP24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 TCTN1Q2MV58 587 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 SGO2Q562F6 1265 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 C12orf29Q8N999 325 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 JOSD2Q8TAC2 188 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 FAM71BQ8TC56 605 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 NT5C1AQ9BXI3 368 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 LRRC19Q9H756 370 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 GOLGA8SH3BPF8 625 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 SELPP16109 830 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 RFC1P35251 1148 aaPredicted RBP24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 KCNJ1P48048 391 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 TAP1Q03518 808 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 TERF2Q15554 542 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 UBA3Q8TBC4 463 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 PIK3R5Q8WYR1 880 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 PAAF1Q9BRP4 392 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 TRAIPQ9BWF2 469 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 RAB17Q9H0T7 212 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 FAM114A2Q9NRY5 505 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 FAN1Q9Y2M0 1017 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 SQORQ9Y6N5 450 aa24.63■■□□□ 1.53
SYNGR3-201ENST00000248121 SIGLEC16A6NMB1 481 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 GJC1P36383 396 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 HSPA9P38646 679 aaKnown RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 PSMC1P62191 440 aaKnown RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 FAM193AP78312 1265 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 KLF1Q13351 362 aaPredicted RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 PDCLQ13371 301 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms