RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ITGB6P18564 788 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 QARSP47897 775 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 EVX2Q03828 476 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 HORMAD1Q86X24 394 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 COL23A1Q86Y22 540 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 RNF103O00237 685 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 C2CD2LO14523 706 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 MAP3K7CLP57077 242 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 MAPK6Q16659 721 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 WDR72Q3MJ13 1102 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 LRRC74BQ6ZQY2 392 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 RNF146Q9NTX7 359 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 USE1Q9NZ43 259 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 SMG5Q9UPR3 1016 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 TMEM2Q9UHN6 1383 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ATP4AP20648 1035 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PKN2Q16513 984 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 PGS1Q32NB8 556 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 AARS2Q5JTZ9 985 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 NT5DC3Q86UY8 548 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ZHX2Q9Y6X8 837 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CEP152O94986 1710 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ITIH4Q14624 930 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 TBCCQ15814 346 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CBWD2Q8IUF1 395 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 VPS39Q96JC1 886 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 TMEM161AQ9NX61 479 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 ECE2O60344 883 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 DEAF1O75398 565 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 TMEM253P0C7T8 217 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 S100A5P33763 92 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 FBXW4P57775 412 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 SLC25A3Q00325 362 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 NEUROG2Q9H2A3 272 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CYTH3O43739 400 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PEX6Q13608 980 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 MICU2Q8IYU8 434 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 HNRNPLLQ8WVV9 542 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 DTNBP1Q96EV8 351 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PAFAH2Q99487 392 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 PRR23D1E9PI22 279 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 PRR23D2P0DMB1 279 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 NPTXRO95502 500 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ITIH2P19823 946 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 FLT3P36888 993 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 FAM117BQ6P1L5 589 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 LRRC8BQ6P9F7 803 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CDH16O75309 829 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PBLDP30039 288 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 SNRNP35Q16560 246 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 MID2Q9UJV3 735 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 SNX9Q9Y5X1 595 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 AATKQ6ZMQ8 1374 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ALOX12P18054 663 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ZIK1Q3SY52 487 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 MFSD4BQ5TF39 518 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PDPK2PQ6A1A2 396 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CPB2Q96IY4 423 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 AP5M1Q9H0R1 490 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ASNSP08243 561 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 MRPS22P82650 360 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 AGKQ53H12 422 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 C16orf89Q6UX73 402 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 UXS1Q8NBZ7 420 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 INTS13Q9NVM9 706 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CAB39Q9Y376 341 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 FCHO1O14526 889 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PLK1P53350 603 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 LDHDQ86WU2 507 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 AENQ8WTP8 325 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 PHF21AQ96BD5 680 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 GCOM2Q9BZD3 368 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 TRPC7Q9HCX4 862 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PALLDQ8WX93 1383 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CPSF4O95639 269 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 TPI1P60174 286 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 GLRA4Q5JXX5 417 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TMED8Q6PL24 325 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 PCDH20Q8N6Y1 951 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 ARHGEF37A1IGU5 675 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 RNF225M0QZC1 329 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 GGPS1O95749 300 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 NPNTQ6UXI9 565 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 FOXP4Q8IVH2 680 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 DCAF4Q8WV16 495 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CLPTM1LQ96KA5 538 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 DNAJC7Q99615 494 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CRB1P82279 1406 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ZNF682O95780 498 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PSMB9P28065 219 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 JAK3P52333 1124 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TRAF2Q12933 501 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 POLD3Q15054 466 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 KBTBD2Q8IY47 623 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms