RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 MYCBPAPQ8TBZ2 947 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SSU72P8A0A1W2PR75 194 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SOWAHDA6NJG2 315 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 MYO1FO00160 1098 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SPOPO43791 374 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 MMEP08473 750 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 DUSP4Q13115 394 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SCINQ9Y6U3 715 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 EPHB6O15197 1021 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 AP5Z1O43299 807 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 NDUFA10O95299 355 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 ITGB1P05556 798 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 AIPL1Q9NZN9 384 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 CNOT8Q9UFF9 292 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 DPYSL4O14531 572 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 GFPT1Q06210 699 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 TCTN1Q2MV58 587 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 FAM102AQ5T9C2 384 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 CES5AQ6NT32 575 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 GIPC2Q8TF65 315 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 FBXO32Q969P5 355 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 PKNOX2Q96KN3 472 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 PPP1R13BQ96KQ4 1090 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 DESI2Q9BSY9 194 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 PBX4Q9BYU1 374 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 WDR35Q9P2L0 1181 aa11.76□□□□□ -0.53
TNFAIP3-201ENST00000237289 RTN2O75298 545 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 MICAL2O94851 1124 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 GDF15Q99988 308 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 MYBPHLA2RUH7 354 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 LCHNA4D1U4 455 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ATP2C2O75185 946 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 PDE4CQ08493 712 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ARHGAP15Q53QZ3 475 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 TPGS2Q68CL5 300 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 TMEM130Q8N3G9 435 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 TC2NQ8N9U0 490 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 PIK3R5Q8WYR1 880 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 FBXO44Q9H4M3 255 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC12A6Q9UHW9 1150 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 CLDN5O00501 218 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 NPR3P17342 541 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 VSTM1Q6UX27 236 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 MMS22LQ6ZRQ5 1243 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 FAM35AQ86V20 835 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 ANKRD52Q8NB46 1076 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 MRPS31Q92665 395 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 CHP1Q99653 195 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 TRPM5Q9NZQ8 1165 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 STAP1Q9ULZ2 295 aa11.75□□□□□ -0.53
TNFAIP3-201ENST00000237289 F8VP50 259 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 F8W810 466 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 CTSAP10619 480 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 PBX2P40425 430 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 RAD23BP54727 409 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 GPC5P78333 572 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 C2orf15Q8WU43 125 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 DNAJC7Q99615 494 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 DPEP3Q9H4B8 488 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 CWH43Q9H720 699 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 ACP6Q9NPH0 428 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 M0QZQ0 153 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 MYBL1P10243 752 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 MYL4P12829 197 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC18A3Q16572 532 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 RTP2Q5QGT7 225 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 DENND5BQ6ZUT9 1274 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 APTXQ7Z2E3 356 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 UXTQ9UBK9 157 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 AFF4Q9UHB7 1163 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 PDE4DIPQ5VU43 2346 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 RBAK-RBAKDNI3L0D1 243 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 CSH1P0DML2 217 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 CSH2P0DML3 217 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 GBP1P32455 592 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 TKTL1P51854 596 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 HTRA4P83105 476 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
TNFAIP3-201ENST00000237289 GDPD5Q8WTR4 605 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms