RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 B3GAT3O94766 335 aa12□□□□□ -0.49
NOD1-201ENST00000222823 MYO1DO94832 1006 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PTGER2P43116 358 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PCSK7Q16549 785 aa12□□□□□ -0.49
NOD1-201ENST00000222823 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 C4orf22Q6V702 233 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ZNF669Q96BR6 464 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 SEC16BQ96JE7 1060 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PPP1R36Q96LQ0 422 aa12□□□□□ -0.49
NOD1-201ENST00000222823 FAM167BQ9BTA0 163 aa12□□□□□ -0.49
NOD1-201ENST00000222823 CATSPERBQ9H7T0 1116 aa12□□□□□ -0.49
NOD1-201ENST00000222823 C20orf96Q9NUD7 363 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 KLK14Q9P0G3 267 aa12□□□□□ -0.49
NOD1-201ENST00000222823 KIAA1257Q9ULG3 409 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 RNF225M0QZC1 329 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 ACO1P21399 889 aaKnown RBP12□□□□□ -0.49
NOD1-201ENST00000222823 RRM1P23921 792 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
NOD1-201ENST00000222823 MYBPC2Q14324 1141 aa12□□□□□ -0.49
NOD1-201ENST00000222823 EFHBQ8N7U6 833 aa12□□□□□ -0.49
NOD1-201ENST00000222823 IPMKQ8NFU5 416 aa12□□□□□ -0.49
NOD1-201ENST00000222823 CYP2W1Q8TAV3 490 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ATG4AQ8WYN0 398 aa12□□□□□ -0.49
NOD1-201ENST00000222823 GLT1D1Q96MS3 346 aa12□□□□□ -0.49
NOD1-201ENST00000222823 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
NOD1-201ENST00000222823 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 CASS4Q9NQ75 786 aa12□□□□□ -0.49
NOD1-201ENST00000222823 LATS2Q9NRM7 1088 aa12□□□□□ -0.49
NOD1-201ENST00000222823 DDIT4Q9NX09 232 aa12□□□□□ -0.49
NOD1-201ENST00000222823 GRID1Q9ULK0 1009 aa12□□□□□ -0.49
NOD1-201ENST00000222823 AMPD2Q01433 879 aa12□□□□□ -0.49
NOD1-201ENST00000222823 APTXQ7Z2E3 356 aaKnown RBP12□□□□□ -0.49
NOD1-201ENST00000222823 FAM83AQ86UY5 434 aa12□□□□□ -0.49
NOD1-201ENST00000222823 LRRC6Q86X45 466 aa12□□□□□ -0.49
NOD1-201ENST00000222823 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 KIRREL3Q8IZU9 778 aa12□□□□□ -0.49
NOD1-201ENST00000222823 DCUN1D1Q96GG9 259 aa12□□□□□ -0.49
NOD1-201ENST00000222823 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
NOD1-201ENST00000222823 TSC22D3Q99576 134 aa12□□□□□ -0.49
NOD1-201ENST00000222823 FAM129AQ9BZQ8 928 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ZNF212Q9UDV6 495 aa12□□□□□ -0.49
NOD1-201ENST00000222823 CASZ1Q86V15 1759 aa12□□□□□ -0.49
NOD1-201ENST00000222823 KBTBD13C9JR72 458 aa12□□□□□ -0.49
NOD1-201ENST00000222823 F8VZ95 297 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PGK2P07205 417 aa12□□□□□ -0.49
NOD1-201ENST00000222823 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 CPT1AP50416 773 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ZNF484Q5JVG2 852 aa12□□□□□ -0.49
NOD1-201ENST00000222823 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
NOD1-201ENST00000222823 LRRC8EQ6NSJ5 796 aa12□□□□□ -0.49
NOD1-201ENST00000222823 LVRNQ6Q4G3 990 aa12□□□□□ -0.49
NOD1-201ENST00000222823 MPZL3Q6UWV2 235 aa12□□□□□ -0.49
NOD1-201ENST00000222823 TRPM8Q7Z2W7 1104 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ZNF571Q7Z3V5 609 aaPredicted RBP12□□□□□ -0.49
NOD1-201ENST00000222823 TTC30BQ8N4P2 665 aa12□□□□□ -0.49
NOD1-201ENST00000222823 CALML6Q8TD86 181 aa12□□□□□ -0.49
NOD1-201ENST00000222823 ZNF384Q8TF68 577 aa12□□□□□ -0.49
NOD1-201ENST00000222823 TRPC7Q9HCX4 862 aa12□□□□□ -0.49
NOD1-201ENST00000222823 DYRK4Q9NR20 520 aa12□□□□□ -0.49
NOD1-201ENST00000222823 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 GTPBP10A4D1E9 387 aaKnown RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 FAM107AO95990 144 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 HIST1H2AGP0C0S8 130 aaPredicted RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 HIST1H2ADP20671 130 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 HNRNPH3P31942 346 aaKnown RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 LAMB3Q13751 1172 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 NAPEPLDQ6IQ20 393 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 FOXR2Q6PJQ5 311 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 CHSY1Q86X52 802 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 ICA1LQ8NDH6 482 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 CASKIN2Q8WXE0 1202 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.99□□□□□ -0.49
NOD1-201ENST00000222823 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 PRRG1O14668 218 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 ZNF263O14978 683 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 ANGPT2O15123 496 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 PSTPIP1O43586 416 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 MCF2P10911 925 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 VDRP11473 427 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 FECHP22830 423 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 HMOX2P30519 316 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 KCNT1Q5JUK3 1230 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 MROH9Q5TGP6 573 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 SLC30A10Q6XR72 485 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 MROH8Q9H579 483 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 REXO2Q9Y3B8 237 aaKnown RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 SNX5Q9Y5X3 404 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 COL14A1Q05707 1796 aaKnown RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 M0QYT0 321 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms