RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 HOMER2Q9NSB8 354 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZNHIT2Q9UHR6 403 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 DMTF1Q9Y222 760 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ARHGAP10A1A4S6 786 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 A8MXQ7 604 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MOGSQ13724 837 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MIER3Q7Z3K6 550 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 METTL13Q8N6R0 699 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZFP28Q8NHY6 868 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 PIP4K2CQ8TBX8 421 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 CEP295NLQ96MC4 621 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ROPN1BQ9BZX4 212 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 RBM38Q9H0Z9 239 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ROPN1Q9HAT0 212 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 PARVBQ9HBI1 364 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 PLGRKTQ9HBL7 147 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZFP69BQ9UJL9 534 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 COQ6Q9Y2Z9 468 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 UBE4BO95155 1302 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 WDR81Q562E7 1941 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 NFKBIEO00221 500 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 KCNA2P16389 499 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.12
GABPB1-201ENST00000220429 CYTH1Q15438 398 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 TKFCQ3LXA3 575 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.12
GABPB1-201ENST00000220429 TTC30AQ86WT1 665 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.12
GABPB1-201ENST00000220429 ERP44Q9BS26 406 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 TMA7Q9Y2S6 64 aaKnown RBP14.27□□□□□ -0.12
GABPB1-201ENST00000220429 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.12
GABPB1-201ENST00000220429 GYG2O15488 501 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 RIPK2O43353 540 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 ATP5DP30049 168 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 FOXN2P32314 431 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 JAM2P57087 298 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 TGFB2P61812 414 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 ASPHQ12797 758 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 STRN3Q13033 797 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 LRP8Q14114 963 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 NIPA1Q7RTP0 329 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 VPS52Q8N1B4 723 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 FBXO25Q8TCJ0 367 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 NEURL2Q9BR09 285 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 STRA6Q9BX79 667 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 AGO4Q9HCK5 861 aaKnown RBP14.27□□□□□ -0.13
GABPB1-201ENST00000220429 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 NDE1Q9NXR1 346 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 NUMBLQ9Y6R0 609 aa14.27□□□□□ -0.13
GABPB1-201ENST00000220429 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
GABPB1-201ENST00000220429 GAS8O95995 478 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TFAP2AP05549 437 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 BRAFP15056 766 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 FGFR4P22455 802 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 SLC5A2P31639 672 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 CHN2P52757 468 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 IGBP1P78318 339 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 PLCB3Q01970 1234 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TNIP1Q15025 636 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ARL13BQ3SXY8 428 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 NADK2Q4G0N4 442 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 PADI6Q6TGC4 694 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ZDHHC7Q9NXF8 308 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TTC7AQ9ULT0 858 aaPredicted RBP14.26□□□□□ -0.13
GABPB1-201ENST00000220429 PHTF1Q9UMS5 762 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 COL11A1P12107 1806 aaPredicted RBP14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ZWINTO95229 277 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 CLPTM1O96005 669 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 P4HBP07237 508 aaKnown RBP14.26□□□□□ -0.13
GABPB1-201ENST00000220429 SMIM18P0DKX4 95 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 EIF2B2P49770 351 aaKnown RBP14.26□□□□□ -0.13
GABPB1-201ENST00000220429 LONRF1Q17RB8 773 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ANO5Q75V66 913 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 LRRC49Q8IUZ0 686 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 RASGEF1CQ8N431 466 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 DDHD1Q8NEL9 900 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 OR6Y1Q8NGX8 325 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ANKRD36BP1Q96IX9 119 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 NKIRAS1Q9NYS0 192 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
GABPB1-201ENST00000220429 TRIM64CA6NLI5 447 aa14.25□□□□□ -0.13
GABPB1-201ENST00000220429 FAM47E-STBD1D6RA91 191 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms