RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SIGLEC16A6NMB1 481 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 E7ENQ6 273 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 HARSP12081 509 aaKnown RBP13.97□□□□□ -0.17
SRP54-201ENST00000216774 KCNA3P22001 575 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 PSMA2P25787 234 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
SRP54-201ENST00000216774 OTUD4Q01804 1114 aaKnown RBP13.97□□□□□ -0.17
SRP54-201ENST00000216774 TFDP1Q14186 410 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 NAA25Q14CX7 972 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 HADHQ16836 314 aaKnown RBP13.97□□□□□ -0.17
SRP54-201ENST00000216774 SEZ6Q53EL9 994 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 OTOAQ7RTW8 1153 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 ANKMY2Q8IV38 441 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 ZNF570Q96NI8 536 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 MRPL4Q9BYD3 311 aaKnown RBP13.97□□□□□ -0.17
SRP54-201ENST00000216774 LHX5Q9H2C1 402 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 SAR1AQ9NR31 198 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 NRBP2Q9NSY0 501 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 HAO1Q9UJM8 370 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 GOLGA8SH3BPF8 625 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 GOLGA8MH3BSY2 632 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 T-ENOLP0DO92 83 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 TROVE2P10155 538 aaKnown RBP eCLIP13.97□□□□□ -0.17
SRP54-201ENST00000216774 PTPRAP18433 802 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 TNFSF9P41273 254 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 C3orf62Q6ZUJ4 267 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 DNERQ8NFT8 737 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 TFAP2BQ92481 460 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 PAFAH2Q99487 392 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 VPS11Q9H270 941 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
SRP54-201ENST00000216774 C19orf81C9J6K1 198 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 OGTO15294 1046 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 CST8O60676 142 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 MSCO60682 206 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 LRCH4O75427 683 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 KRT3P12035 628 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 RFC1P35251 1148 aaPredicted RBP13.96□□□□□ -0.17
SRP54-201ENST00000216774 TRPC3Q13507 836 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 SEPT7Q16181 437 aaKnown RBP13.96□□□□□ -0.17
SRP54-201ENST00000216774 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 ANKRD20A2Q5SQ80 823 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 ANKRD20A1Q5TYW2 823 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 ANKRD20A3Q5VUR7 823 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 ANKRD22Q5VYY1 191 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 RHPN2Q8IUC4 686 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 MZB1Q8WU39 189 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 RSAD2Q8WXG1 361 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 SLC7A6OSQ96CW6 309 aaPredicted RBP13.96□□□□□ -0.17
SRP54-201ENST00000216774 RNPEPL1Q9HAU8 725 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 LNPEPQ9UIQ6 1025 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 SUFUQ9UMX1 484 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 PPME1Q9Y570 386 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 SSC5DA1L4H1 1573 aa13.96□□□□□ -0.17
SRP54-201ENST00000216774 TNS1Q9HBL0 1735 aaKnown RBP13.96□□□□□ -0.18
SRP54-201ENST00000216774 MED7O43513 233 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 MAFO75444 373 aaPredicted RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 BANF1O75531 89 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 EGFRP00533 1210 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 FGFR1P11362 822 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 KDELR1P24390 212 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 RPS12P25398 132 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 SSTR1P30872 391 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 ASPAP45381 313 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 HMGCS2P54868 508 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 GDF10P55107 478 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 MSS51Q4VC12 460 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 NLRP9Q7RTR0 991 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 BANPQ8N9N5 519 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 MRRFQ96E11 262 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 TCHPQ9BT92 498 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 TBC1D10AQ9BXI6 508 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 TLE6Q9H808 572 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 WDR35Q9P2L0 1181 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 ZFP69BQ9UJL9 534 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 LOC285556D6RIA3 1793 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 DPEP1P16444 411 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 CALB2P22676 271 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 ADRA1DP25100 572 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 IL1R2P27930 398 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 DYNLT1P63172 113 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.187e-8■□□□□ 11.2
SRP54-201ENST00000216774 PTPN20Q4JDL3 420 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 PALM2Q8IXS6 379 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms