RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 PRPF39Q86UA1 669 aaKnown RBP14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SEPT8Q92599 483 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SPATA16Q9BXB7 569 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 FOXN3O00409 490 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-201ENST00000215793 RHOBTB1O94844 696 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 NPTXRO95502 500 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 GARTP22102 1010 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 OR1G1P47890 313 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 RUNX1T1Q06455 604 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 FBXW10Q5XX13 1052 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 WDR93Q6P2C0 686 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 ADCK1Q86TW2 530 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 ATP6V0D2Q8N8Y2 350 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 ILKAPQ9H0C8 392 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-201ENST00000215793 ADGRB3O60242 1522 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 LOC100653049A0A140TA62 436 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 STX7O15400 261 aaKnown RBP14.1□□□□□ -0.15
SF3A1-201ENST00000215793 KRT34O76011 436 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 KCNA3P22001 575 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 GEMP55040 296 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 WLSQ5T9L3 541 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 CYP4A22Q5TCH4 519 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 UGT3A1Q6NUS8 523 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 GJB7Q6PEY0 223 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 PLD3Q8IV08 490 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 L2HGDHQ9H9P8 463 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 MYO1GB0I1T2 1018 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SLC37A4O43826 429 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 KDM1AO60341 852 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 GLRA3O75311 464 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 POU4F1Q01851 419 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 CCDC15Q0P6D6 951 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 PDK2Q15119 407 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 AGAP9Q5VTM2 703 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 CENPPQ6IPU0 288 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 FAM162AQ96A26 154 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 DDIT4Q9NX09 232 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 SETBP1Q9Y6X0 1596 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 HEATR9A2RTY3 570 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 VDRP11473 427 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 NAMPTP43490 491 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 COPAP53621 1224 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CCDC126Q96EE4 140 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 DDX28Q9NUL7 540 aaKnown RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 KBTBD4Q9NVX7 518 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 DPP3Q9NY33 737 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 SCN3BQ9NY72 215 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CDC42BPBQ9Y5S2 1711 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CAND2O75155 1236 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 TGM2P21980 687 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 ALDH1A3P47895 512 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 GMPSP49915 693 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 DNAJC3Q13217 504 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 ZRANB3Q5FWF4 1079 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 FAR2Q96K12 515 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 RPS6KL1Q9Y6S9 549 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CCL15-CCL14A0A0B4J2E2 113 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 KRT87PA6NCN2 255 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 ODC1P11926 461 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 PPP3CCP48454 512 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CCL15Q16663 113 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 DENND1BQ6P3S1 775 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 B4GALNT2Q8NHY0 566 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 CYGBQ8WWM9 190 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 WDCPQ9H6R7 721 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 SPATA31A1Q5TZJ5 1347 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 WDR47O94967 919 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 RARGP13631 454 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 ZNF157P51786 506 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 MRPS35P82673 323 aaKnown RBP14.09□□□□□ -0.15
SF3A1-201ENST00000215793 MCL1Q07820 350 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 KDM7AQ6ZMT4 941 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 P3H2Q8IVL5 708 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 INPP5DQ92835 1189 aa14.09□□□□□ -0.15
SF3A1-201ENST00000215793 M0QYT0 321 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 TIMM44O43615 452 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 SREBF1P36956 1147 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 BLVRAP53004 296 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 ZNF484Q5JVG2 852 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 CRLS1Q9UJA2 301 aa14.08□□□□□ -0.15
SF3A1-201ENST00000215793 AAR2Q9Y312 384 aaKnown RBP14.08□□□□□ -0.15
SF3A1-201ENST00000215793 PTPN7P35236 360 aa14.08□□□□□ -0.16
SF3A1-201ENST00000215793 HSPA13P48723 471 aa14.08□□□□□ -0.16
SF3A1-201ENST00000215793 MTM1Q13496 603 aa14.08□□□□□ -0.16
SF3A1-201ENST00000215793 AARS2Q5JTZ9 985 aaKnown RBP14.08□□□□□ -0.16
SF3A1-201ENST00000215793 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms