RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 KIF3CO14782 793 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 ITGB3P05106 788 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 PDHA1P08559 390 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 GHRP10912 638 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 NQO1P15559 274 aaKnown RBP11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 PCK1P35558 622 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 ATP11AP98196 1134 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 MESDQ14696 234 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 SGSM1Q2NKQ1 1148 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 SYCE1Q8N0S2 351 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 WNT8BQ93098 351 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 CYTH4Q9UIA0 394 aa11.92□□□□□ -0.5
GPATCH1-201ENST00000170564 TNPO2O14787 897 aaKnown RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 PPEF2O14830 753 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 ACSL3O95573 720 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 TMEM191BP0C7N4 346 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 TBXAS1P24557 533 aaPredicted RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 RGS2P41220 211 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 AP3M2P53677 418 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 EIF3BP55884 814 aaKnown RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 IRF5Q13568 498 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 C1orf131Q8NDD1 294 aaKnown RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 TCRBV7S2A1N4TA0A589 114 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 SRRM3A6NNA2 597 aaPredicted RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 H0Y3Z8 333 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 PSEN2P49810 448 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 ZNF677Q86XU0 584 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 SLITRK6Q9H5Y7 841 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 BHMG1C9JSJ3 638 aaPredicted RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 CYBAP13498 195 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 POU5F1Q01860 360 aaKnown RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 RASAL2Q9UJF2 1139 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 NME7Q9Y5B8 376 aa11.91□□□□□ -0.5
GPATCH1-201ENST00000170564 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 TCRBV5S1A1TA0A578 114 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 THAP12O43422 761 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 CYP2C9P11712 490 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 INHBEP58166 350 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 LONRF1Q17RB8 773 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 CCDC105Q8IYK2 499 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 C18orf8Q96DM3 657 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 CALR3Q96L12 384 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 FAM81BQ96LP2 452 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 HERPUD2Q9BSE4 406 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 CA12O43570 354 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 SUN1O94901 812 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 IL18RAPO95256 599 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 MYL3P08590 195 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 KRT19P08727 400 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 KRT16P08779 473 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 PYGMP11217 842 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 SLC8A3P57103 927 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 FAM47EQ6ZV65 393 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 MAGEC3Q8TD91 643 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 ERP44Q9BS26 406 aa11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 TTC7AQ9ULT0 858 aaPredicted RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 ABT1Q9ULW3 272 aaKnown RBP11.9□□□□□ -0.5
GPATCH1-201ENST00000170564 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 AOC2O75106 756 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 NPTXRO95502 500 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 VPS41P49754 854 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 RAD23BP54727 409 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 MAMLD1Q13495 774 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 ALKAL1Q6UXT8 129 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 SOCS4Q8WXH5 440 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 ANKRD36BP1Q96IX9 119 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 ZNF570Q96NI8 536 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 SNTG2Q9NY99 539 aa11.9□□□□□ -0.51
GPATCH1-201ENST00000170564 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
GPATCH1-201ENST00000170564 AP1G2O75843 785 aa11.89□□□□□ -0.51
GPATCH1-201ENST00000170564 PGK1P00558 417 aa11.89□□□□□ -0.51
GPATCH1-201ENST00000170564 TCF4P15884 667 aa11.89□□□□□ -0.51
GPATCH1-201ENST00000170564 POLR2BP30876 1174 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms