RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PITPNM1O00562 1244 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 WARSP23381 471 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CTNNA2P26232 953 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SLC1A1P43005 524 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GABRB2P47870 512 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GSCP56915 257 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 DAB2IPQ5VWQ8 1189 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 OSTM1Q86WC4 334 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SENP8Q96LD8 212 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 FTHL17Q9BXU8 183 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 SYNCQ9H7C4 482 aa20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TTC7AQ9ULT0 858 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-201ENST00000162749 INPPL1O15357 1258 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 EOMESO95936 686 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ATN1P54259 1190 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ZNF211Q13398 564 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 WSCD1Q658N2 575 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ARHGAP17Q68EM7 881 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 XYLT1Q86Y38 959 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GABRDO14764 452 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 FGGP02679 453 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 PSMC1P62191 440 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ZNF252P-AS1Q0IIN9 211 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 DCUN1D2Q6PH85 259 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ZBTB9Q96C00 473 aa20.78■□□□□ 0.92
TNFRSF1A-201ENST00000162749 LAMA2P24043 3122 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 MYBL2P10244 700 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CCDC130P13994 396 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 AARSP49588 968 aaKnown RBP eCLIP20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 FAM189BP81408 668 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TAP1Q03518 808 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 TUSC3Q13454 348 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 ZNF771Q7L3S4 317 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 HDAC7Q8WUI4 952 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 LRRC1Q9BTT6 524 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 CRISPLD2Q9H0B8 497 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 WDR35Q9P2L0 1181 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 IP6K2Q9UHH9 426 aa20.77■□□□□ 0.92
TNFRSF1A-201ENST00000162749 GOLGA8SH3BPF8 625 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TULP2O00295 520 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MCM3P25205 808 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FAM193AP78312 1265 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 OGDHQ02218 1023 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PLEKHG4Q58EX7 1191 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 AADACL2Q6P093 401 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CCNI2Q6ZMN8 369 aaPredicted RBP20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 B3GALNT2Q8NCR0 500 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DBF4BQ8NFT6 615 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TNIP3Q96KP6 325 aa20.77■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SIGLEC16A6NMB1 481 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FAM163BP0C2L3 166 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 KRT3P12035 628 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MAN1A1P33908 653 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ZNF268Q14587 947 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CLLU1OSQ5K130 101 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PMF1Q6P1K2 205 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SLC35F5Q8WV83 523 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HESX1Q9UBX0 185 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MICAL3Q7RTP6 2002 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 E5RJQ4 531 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 B3GAT3O94766 335 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PYGMP11217 842 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 RFC1P35251 1148 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 RWDD2BP57060 319 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TIGD5Q53EQ6 642 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 GLB1LQ6UWU2 654 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 IPO4Q8TEX9 1081 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MCRS1Q96EZ8 462 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ZNF333Q96JL9 665 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HINFPQ9BQA5 517 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 AP1M1Q9BXS5 423 aa20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DMGDHQ9UI17 866 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ATP2C2O75185 946 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ACAT1P24752 427 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PDE4CQ08493 712 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CCDC142Q17RM4 750 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PAN2Q504Q3 1202 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SLC39A5Q6ZMH5 540 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 GSPT2Q8IYD1 628 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TMEM86AQ8N2M4 240 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SLC2A14Q8TDB8 520 aa20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DDX27Q96GQ7 796 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TIMM13Q9Y5L4 95 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PIK3R2O00459 728 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SETSIPP0DME0 302 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ADORA2BP29275 332 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MRPS25P82663 173 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CD300LGQ6UXG3 332 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DSTYKQ6XUX3 929 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ANKRD52Q8NB46 1076 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 JOSD2Q8TAC2 188 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DNAI2Q9GZS0 605 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 METTL5Q9NRN9 209 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DDX43Q9NXZ2 648 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 USTQ9Y2C2 406 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 KRIT1O00522 736 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 RGS7P49802 495 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms