RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ARSEP51690 589 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 NRLP54845 237 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 ENPEPQ07075 957 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 GPS1Q13098 491 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 FASTKD3Q14CZ7 662 aaKnown RBP13.83□□□□□ -0.2
CTNS-201ENST00000046640 TAF5Q15542 800 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 SPATA21Q7Z572 469 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 UBR7Q8N806 425 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 SIX4Q9UIU6 781 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 CD48P09326 243 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 PSMC1P62191 440 aaKnown RBP13.82□□□□□ -0.2
CTNS-201ENST00000046640 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 TRMT10CQ7L0Y3 403 aaKnown RBP13.82□□□□□ -0.2
CTNS-201ENST00000046640 KIAA0319LQ8IZA0 1049 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 CPXM1Q96SM3 734 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTNS-201ENST00000046640 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 SGK1O00141 431 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 GRAP2O75791 330 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 CALB1P05937 261 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 KRT3P12035 628 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 RNASELQ05823 741 aaKnown RBP13.82□□□□□ -0.2
CTNS-201ENST00000046640 RAB6CQ53S08 254 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 ZNF667Q5HYK9 610 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 SPOCD1Q6ZMY3 1216 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 TSHZ1Q6ZSZ6 1077 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 CCDC89Q8N998 374 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 SLCO2A1Q92959 643 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
CTNS-201ENST00000046640 RAB6CQ9H0N0 254 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 SMARCAD1Q9H4L7 1026 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 SAYSD1Q9NPB0 183 aa13.82□□□□□ -0.2
CTNS-201ENST00000046640 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 LIASO43766 372 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 IL1R2P27930 398 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 COPS2P61201 443 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 GAD2Q05329 585 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 FZD8Q9H461 694 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 PTPRHQ9HD43 1115 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 METTL5Q9NRN9 209 aaKnown RBP13.81□□□□□ -0.2
CTNS-201ENST00000046640 NEU2Q9Y3R4 380 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 PAPPA2Q9BXP8 1791 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 SLC25A27O95847 323 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 CETN2P41208 172 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 TFDP1Q14186 410 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 SH3PXD2AQ5TCZ1 1133 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 PLPPR4Q7Z2D5 763 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 ARFGAP1Q8N6T3 406 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 HSPH1Q92598 858 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 TMEM237Q96Q45 408 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 MPHOSPH6Q99547 160 aaKnown RBP13.81□□□□□ -0.2
CTNS-201ENST00000046640 NKIRAS1Q9NYS0 192 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 RASA4BC9J798 803 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 RASA4O43374 803 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 LGR5O75473 907 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 TJP3O95049 919 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 MGAT5Q09328 741 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 TTLL4Q14679 1199 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 ANKMY2Q8IV38 441 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 LRRN4Q8WUT4 740 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 RSRC1Q96IZ7 334 aaKnown RBP13.81□□□□□ -0.2
CTNS-201ENST00000046640 HEXIM2Q96MH2 286 aaKnown RBP13.81□□□□□ -0.2
CTNS-201ENST00000046640 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
CTNS-201ENST00000046640 WDR90Q96KV7 1748 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 TCRBV5S1A1TA0A578 114 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 NEBLO76041 1014 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 UPP2O95045 317 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 ERBB2P04626 1255 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 GSTA1P08263 222 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 KLRC2P26717 231 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 FOXN2P32314 431 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 MAN1A1P33908 653 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 GJA5P36382 358 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 AP3M2P53677 418 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 RAD23BP54727 409 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 CDO1Q16878 200 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 NLRP7Q8WX94 980 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms