RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LMO2P25791 158 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 PRCPP42785 496 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 TEAD2Q15562 447 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 TAF12Q16514 161 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 ZNF699Q32M78 642 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 EDRF1Q3B7T1 1238 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 INTS8Q75QN2 995 aaKnown RBP16.09■□□□□ 0.17
PHGDH-231ENST00000641939 FAM186BQ8IYM0 893 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 SHKBP1Q8TBC3 707 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 SYT15Q9BQS2 421 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 GPR88Q9GZN0 384 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 MFSD1Q9H3U5 465 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 ZNF334Q9HCZ1 680 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-231ENST00000641939 SLC2A4RGQ9NR83 387 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
PHGDH-231ENST00000641939 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 ARIH1Q9Y4X5 557 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-231ENST00000641939 A0A1W2PRU2 124 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 MYBPHLA2RUH7 354 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 VNN1O95497 513 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 PDGFRBP09619 1106 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 KRT13P13646 458 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 PSMC2P35998 433 aaKnown RBP16.08■□□□□ 0.16
PHGDH-231ENST00000641939 GNL1P36915 607 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-231ENST00000641939 VAMP7P51809 220 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 NCOA4Q13772 614 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 ZACNQ401N2 412 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 CFAP221Q4G0U5 840 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 FAM78AQ5JUQ0 283 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 TANGO2Q6ICL3 276 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 GAREM2Q75VX8 874 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 SV2AQ7L0J3 742 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-231ENST00000641939 SIX5Q8N196 739 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 GPR152Q8TDT2 470 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 GIPC2Q8TF65 315 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 ELSPBP1Q96BH3 223 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 FUBP3Q96I24 572 aaKnown RBP eCLIP16.08■□□□□ 0.16
PHGDH-231ENST00000641939 ZSWIM3Q96MP5 696 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 ASB16Q96NS5 453 aa16.08■□□□□ 0.16
PHGDH-231ENST00000641939 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.16
PHGDH-231ENST00000641939 MYH10P35580 1976 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ATP2C2O75185 946 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 CLSTN1O94985 981 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 FCARP24071 287 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 CYP2F1P24903 491 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 GABRR2P28476 465 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
PHGDH-231ENST00000641939 RPL10AP62906 217 aaKnown RBP16.07■□□□□ 0.16
PHGDH-231ENST00000641939 GPC5P78333 572 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ENPEPQ07075 957 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 MAPRE1Q15691 268 aaKnown RBP16.07■□□□□ 0.16
PHGDH-231ENST00000641939 CCDC142Q17RM4 750 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 OR6B3Q8NGW1 331 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 SMARCD2Q92925 531 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 TSG101Q99816 390 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 KCNH6Q9H252 994 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ATXN3LQ9H3M9 355 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 SLITRK6Q9H5Y7 841 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 CRTAC1Q9NQ79 661 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 CA14Q9ULX7 337 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 F5P12259 2224 aa16.07■□□□□ 0.16
PHGDH-231ENST00000641939 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 KRBA1A5PL33 1030 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 CETN3O15182 167 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 TRIM49P0CI25 452 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 TRIM49CP0CI26 452 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 CDC25CP30307 473 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 AVPR2P30518 371 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 GPR15P49685 360 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 VCPP55072 806 aaKnown RBP16.06■□□□□ 0.16
PHGDH-231ENST00000641939 UBE2HP62256 183 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 ARHGAP15Q53QZ3 475 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 ASTLQ6HA08 431 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-231ENST00000641939 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 ZSCAN18Q8TBC5 510 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MYCBPAPQ8TBZ2 947 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 TAF4BQ92750 862 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MYLPFQ96A32 169 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MKNK1Q9BUB5 465 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 PLA2G2FQ9BZM2 168 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 MIA3Q5JRA6 1907 aa16.06■□□□□ 0.16
PHGDH-231ENST00000641939 A8MXQ7 604 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 CSH1P0DML2 217 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 CSH2P0DML3 217 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 EPB41P11171 864 aaKnown RBP16.05■□□□□ 0.16
PHGDH-231ENST00000641939 P4HA1P13674 534 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms