RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TMC6Q7Z403 805 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 DDX53Q86TM3 631 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 DRC7Q8IY82 874 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 GSTCDQ8NEC7 633 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 FBXL13Q8NEE6 735 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 SEMA4DQ92854 862 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 ZBP1Q9H171 429 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.88e-8■■■■□ 25.6
PHGDH-228ENST00000641847 FAM207AQ9NSI2 230 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 SLC38A7Q9NVC3 462 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 ZSCAN32Q9NX65 697 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 DPP3Q9NY33 737 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 EPS15L1Q9UBC2 864 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 ANGPTL2Q9UKU9 493 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 SMG5Q9UPR3 1016 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 FRYQ5TBA9 3013 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 FNDC1Q4ZHG4 1894 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 ZC3H11AO75152 810 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 THP07101 528 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SLC9A1P19634 815 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 CYP3A5P20815 502 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 PON1P27169 355 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 APBA1Q02410 837 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 CSTF1Q05048 431 aaKnown RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SOX4Q06945 474 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 LRMPQ12912 555 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 TRPC3Q13507 836 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 NAB2Q15742 525 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 ZBTB6Q15916 424 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 ZNF699Q32M78 642 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 NOMO2Q5JPE7 1267 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SPECC1LQ69YQ0 1117 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SCARA3Q6AZY7 606 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 TRIM65Q6PJ69 517 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 EHBP1Q8NDI1 1231 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 CMASQ8NFW8 434 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 CXorf38Q8TB03 319 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 NETO1Q8TDF5 533 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 RSAD2Q8WXG1 361 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 AUTS2Q8WXX7 1259 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 PI4K2AQ9BTU6 479 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 GOLGA2P5Q9HBQ8 144 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 WDR6Q9NNW5 1121 aaKnown RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SIX2Q9NPC8 291 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 RAB20Q9NX57 234 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 MIOSQ9NXC5 875 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 SIX4Q9UIU6 781 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 COQ4Q9Y3A0 265 aa10.07□□□□□ -0.8
PHGDH-228ENST00000641847 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
PHGDH-228ENST00000641847 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 CASTOR2A6NHX0 329 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 EPHB6O15197 1021 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 LRRN2O75325 713 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 MYL6P60660 151 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 RBP5P82980 135 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 RNASELQ05823 741 aaKnown RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 C9orf57Q5W0N0 161 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 SPOPLQ6IQ16 392 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 GJB7Q6PEY0 223 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 SPC24Q8NBT2 197 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 CCDC150Q8NCX0 1101 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 LMO3Q8TAP4 145 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 ZNF560Q96MR9 790 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 NT5C1BQ96P26 610 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 FAM126AQ9BYI3 521 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 GANQ9H2C0 597 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 EPC1Q9H2F5 836 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 MRPL17Q9NRX2 175 aaKnown RBP10.06□□□□□ -0.8
PHGDH-228ENST00000641847 TBC1D13Q9NVG8 400 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 APEX2Q9UBZ4 518 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 AGAP1Q9UPQ3 857 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
PHGDH-228ENST00000641847 CCDC195A0A1B0GUA6 201 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 KANSL1LA0AUZ9 987 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 PODXLO00592 558 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 PPEF2O14830 753 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 NCAM2O15394 837 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 B4GALT3O60512 393 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 NOL4O94818 638 aa10.05□□□□□ -0.8
PHGDH-228ENST00000641847 ASS1P00966 412 aaKnown RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 CST3P01034 146 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-228ENST00000641847 GYPCP04921 128 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms