RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GOLGA8RI6L899 631 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 ATP6V1G2O95670 118 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 PRKCBP05771 671 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 KRT15P19012 456 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 OTUD4Q01804 1114 aaKnown RBP17.73■□□□□ 0.43
PHGDH-223ENST00000641597 TRPC3Q13507 836 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 ZNF699Q32M78 642 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 ACCSLQ4AC99 568 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 RNASEH2BQ5TBB1 312 aaKnown RBP17.73■□□□□ 0.43
PHGDH-223ENST00000641597 TRABD2AQ86V40 505 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 CPXM1Q96SM3 734 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 SDCBP2Q9H190 292 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 NOD2Q9HC29 1040 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 GINM1Q9NU53 330 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 NKIRAS1Q9NYS0 192 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 STK38LQ9Y2H1 464 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 SIP14410 1827 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 KAT6AQ92794 2004 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 MCM3APO60318 1980 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 LRCH4O75427 683 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 MAFO75444 373 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 TCEA3O75764 348 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 PSMA2P25787 234 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 ICAM3P32942 547 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 CLCN3P51790 818 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 VCPP55072 806 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 GPX6P59796 221 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 VGLL4Q14135 290 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 SLC1A5Q15758 541 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 TFDP3Q5H9I0 405 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 WDR49Q8IV35 697 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 GPATCH11Q8N954 259 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 TMEM35BQ8NCS4 154 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 EVPLQ92817 2033 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 CST8O60676 142 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 SUN1O94901 812 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 KRT16P08779 473 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 ENPEPQ07075 957 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 STAT4Q14765 748 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 DUOXA2Q1HG44 320 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 RBM41Q96IZ5 413 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 MAK16Q9BXY0 300 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 MRPL4Q9BYD3 311 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 TRABDQ9H4I3 376 aa17.72■□□□□ 0.43
PHGDH-223ENST00000641597 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
PHGDH-223ENST00000641597 WDR91A4D1P6 747 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 ATP5DP30049 168 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 TFDP1Q14186 410 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 GALNTL6Q49A17 601 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 P3H4Q92791 437 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 ASCC2Q9H1I8 757 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-223ENST00000641597 TMEM134Q9H6X4 195 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 SMYD3Q9H7B4 428 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 CLUHO75153 1309 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 NFICP08651 508 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 GJC2Q5T442 439 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-223ENST00000641597 UNC45BQ8IWX7 931 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 PIWIL1Q96J94 861 aaKnown RBP17.71■□□□□ 0.43
PHGDH-223ENST00000641597 MAGEB18Q96M61 343 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 PITPNM3Q9BZ71 974 aa17.71■□□□□ 0.43
PHGDH-223ENST00000641597 ALG13Q9NP73 1137 aaKnown RBP17.71■□□□□ 0.43
PHGDH-223ENST00000641597 METTL5Q9NRN9 209 aaKnown RBP17.71■□□□□ 0.43
PHGDH-223ENST00000641597 STAM2O75886 525 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 ERBB2P04626 1255 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 CALB1P05937 261 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 KRT3P12035 628 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 IGBP1P78318 339 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 LACTBP83111 547 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 SLC25A11Q02978 314 aaKnown RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 NPNTQ6UXI9 565 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 ARHGEF18Q6ZSZ5 1173 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 HSPH1Q92598 858 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 SIX4Q9UIU6 781 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 ARL2BPQ9Y2Y0 163 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 FZD9O00144 591 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 OGTO15294 1046 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 USP2O75604 605 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 ASMTLO95671 621 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 CTCFP49711 727 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 PSMC1P62191 440 aaKnown RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 BNIP1Q12981 228 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 MAPK6Q16659 721 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 SGSM1Q2NKQ1 1148 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 MOB2Q70IA6 237 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-223ENST00000641597 BBOF1Q8ND07 529 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 CFAP57Q96MR6 1250 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms