RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ECHDC2Q86YB7 292 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 PHF13Q86YI8 300 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-219ENST00000641513 FAM126BQ8IXS8 530 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 LRRC57Q8N9N7 239 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 APPL2Q8NEU8 664 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 PPP1R10Q96QC0 940 aaKnown RBP9.38□□□□□ -0.91
PHGDH-219ENST00000641513 ZSWIM1Q9BR11 485 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 SELENOOQ9BVL4 669 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 TSPYL2Q9H2G4 693 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-219ENST00000641513 MRPL47Q9HD33 250 aaKnown RBP9.38□□□□□ -0.91
PHGDH-219ENST00000641513 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 CWC15Q9P013 229 aaKnown RBP9.38□□□□□ -0.91
PHGDH-219ENST00000641513 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 KIAA1257Q9ULG3 409 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 PCNTO95613 3336 aa9.38□□□□□ -0.91
PHGDH-219ENST00000641513 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GOLGA8SH3BPF8 625 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 PODXLO00592 558 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 CYB561D2O14569 222 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 SPTLC1O15269 473 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 CEP104O60308 925 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 IVLP07476 585 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 COMTP21964 271 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 LRPAP1P30533 357 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GNL1P36915 607 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 CDK7P50613 346 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 CLCNKBP51801 687 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 AFF1P51825 1210 aaKnown RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 LILRA4P59901 499 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 RNASE9P60153 205 aaKnown RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 PPP2R5EQ16537 467 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 SOWAHAQ2M3V2 549 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GOLGA7BQ2TAP0 167 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 C11orf63Q6NUN7 778 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 LLGL2Q6P1M3 1020 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 DNAJC24Q6P3W2 148 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 MON1BQ7L1V2 547 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 SLFN11Q7Z7L1 901 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 NT5DC3Q86UY8 548 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 IFT20Q8IY31 132 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 ADGRF2Q8IZF7 708 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 UBA3Q8TBC4 463 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 URGCPQ8TCY9 931 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 ACTRT1Q8TDG2 376 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 MS4A14Q96JA4 679 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 VCPIP1Q96JH7 1222 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 SH3GL2Q99962 352 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 ZNF518BQ9C0D4 1074 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 FAM124BQ9H5Z6 455 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GDF3Q9NR23 364 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 FAM49BQ9NUQ9 324 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 EHD2Q9NZN4 543 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 HESX1Q9UBX0 185 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 TTC7AQ9ULT0 858 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-219ENST00000641513 ALG6Q9Y672 507 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 SCINQ9Y6U3 715 aa9.37□□□□□ -0.91
PHGDH-219ENST00000641513 GOLGA8KD6RF30 607 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 CCDC188H7C350 402 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 MYO1FO00160 1098 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 OPA1O60313 960 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SHOX2O60902 331 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 MTA2O94776 668 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 GJB6O95452 261 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 RPL9P32969 192 aaKnown RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 C2orf54Q08AI8 447 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 GRIK3Q13003 919 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 STILQ15468 1287 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 CNGA2Q16280 664 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 C8orf74Q6P047 294 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 DCUN1D2Q6PH85 259 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 FBXO46Q6PJ61 603 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SLC39A5Q6ZMH5 540 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SLC24A5Q71RS6 500 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 UNC93AQ86WB7 457 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 UBL4BQ8N7F7 174 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 DNAJC5GQ8N7S2 189 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 C12orf29Q8N999 325 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 GSTCDQ8NEC7 633 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 IPO4Q8TEX9 1081 aaKnown RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SEPT8Q92599 483 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms