RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 GUCY2FP51841 1108 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 LILRA4P59901 499 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 COPS2P61201 443 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 BST2Q10589 180 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 PDCLQ13371 301 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 TUSC3Q13454 348 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 HADHQ16836 314 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ZNF618Q5T7W0 954 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 GLB1LQ6UWU2 654 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 LRRC8DQ7L1W4 858 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ARCQ7LC44 396 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 POLNQ7Z5Q5 900 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ADGRF2Q8IZF7 708 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 WNT8BQ93098 351 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 C18orf25Q96B23 403 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 RBM41Q96IZ5 413 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 HSFY1Q96LI6 401 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ADAM2Q99965 735 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 AGO3Q9H9G7 860 aaKnown RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 TMEM51Q9NW97 253 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 KLK14Q9P0G3 267 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 FEZ2Q9UHY8 353 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 TSPAN16Q9UKR8 245 aa10.28□□□□□ -0.76
PHGDH-215ENST00000641371 V9GYY5 206 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-215ENST00000641371 TCRBV5S1A1TA0A578 114 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ARL5CA6NH57 179 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 TMEM189-UBE2V1I3L0A0 370 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PDE2AO00408 941 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 KRIT1O00522 736 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PODXLO00592 558 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 CYB561D2O14569 222 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 KRT7P08729 469 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ODC1P11926 461 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 KRT3P12035 628 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 CHRNA3P32297 505 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 AARSP49588 968 aaKnown RBP eCLIP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PEX5P50542 639 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PSMC1P62191 440 aaKnown RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 FAM189BP81408 668 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 DHX34Q14147 1143 aaKnown RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 MAPRE1Q15691 268 aaKnown RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 LONRF2Q1L5Z9 754 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 SOWAHAQ2M3V2 549 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PTPN20Q4JDL3 420 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ODF2Q5BJF6 829 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 DENND1BQ6P3S1 775 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 AGMOQ6ZNB7 445 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 METTL23Q86XA0 190 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 KATNAL2Q8IYT4 538 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 TNS4Q8IZW8 715 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ANKRD52Q8NB46 1076 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 NOA1Q8NC60 698 aaKnown RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 LRRN4CLQ8ND94 238 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 EXD1Q8NHP7 514 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PPP1R13LQ8WUF5 828 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 SEPT8Q92599 483 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ELMO3Q96BJ8 720 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 MCRS1Q96EZ8 462 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 GAD1Q99259 594 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PSMB7Q99436 277 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 FAM129AQ9BZQ8 928 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 RAB17Q9H0T7 212 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 ANKZF1Q9H8Y5 726 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 STIM2Q9P246 746 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 RASAL2Q9UJF2 1139 aa10.27□□□□□ -0.77
PHGDH-215ENST00000641371 PACSIN2Q9UNF0 486 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-215ENST00000641371 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 C9IYK1 514 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 GABRDO14764 452 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 NDC80O14777 642 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 SART1O43290 800 aaKnown RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-215ENST00000641371 RNF8O76064 485 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 FGGP02679 453 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 CYP11A1P05108 521 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 RHOXF2BP0C7M4 288 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 TYMPP19971 482 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 PTPN7P35236 360 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 FNTAP49354 379 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 DNA2P51530 1060 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 C2orf54Q08AI8 447 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 GPS2Q13227 327 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 CUL1Q13616 776 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 GOLGA7BQ2TAP0 167 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 PKDCCQ504Y2 493 aa10.26□□□□□ -0.77
PHGDH-215ENST00000641371 FBXO38Q6PIJ6 1188 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms