RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 FAM13CQ8NE31 585 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 ZNF75CPQ92670 426 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 IMPG2Q9BZV3 1241 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 YARSP54577 528 aaKnown RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 MCCD1P59942 119 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 TAF11Q15544 211 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 OASLQ15646 514 aaKnown RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 FAM83AQ86UY5 434 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 RIBC1Q8N443 379 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 TFAP2BQ92481 460 aa17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 RAB3IPQ96QF0 476 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 PSMC3IPQ9P2W1 217 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-228ENST00000640306 C2orf71A6NGG8 1288 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 CST8O60676 142 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 SESN3P58005 492 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 CLDN10P78369 228 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 C10orf82Q8WW14 230 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 SLC7A6OSQ96CW6 309 aaPredicted RBP17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 GPRASP2Q96D09 838 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 TTC25Q96NG3 672 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 NFKBIEO00221 500 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 ALOX15BO15296 676 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 PRPF4O43172 522 aaKnown RBP eCLIP17.4■□□□□ 0.384e-7■■■■□ 21.3
HNRNPU-228ENST00000640306 CD19P15391 556 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 ALDH3A1P30838 453 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 RFC1P35251 1148 aaPredicted RBP17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 CDKN2BP42772 138 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 MORF4L2Q15014 288 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 ABHD15Q6UXT9 468 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 EP400NLQ6ZTU2 488 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 TCP10LQ8TDR4 215 aa17.4■□□□□ 0.38
HNRNPU-228ENST00000640306 TYROBPO43914 113 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 ITGBL1O95965 494 aaPredicted RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 RAD23BP54727 409 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 TAF5Q15542 800 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 FBXO36Q8NEA4 188 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 JOSD2Q8TAC2 188 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 NSUN6Q8TEA1 469 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.371e-8■■■□□ 14.6
HNRNPU-228ENST00000640306 VCPIP1Q96JH7 1222 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 NUDCD1Q96RS6 583 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 PAFAH2Q99487 392 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 CGRRF1Q99675 332 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 WDR83Q9BRX9 315 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 LRMDAQ9H2I8 198 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 ZFP69BQ9UJL9 534 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 SMG5Q9UPR3 1016 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 NEFHP12036 1026 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 PSMA2P25787 234 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 IL1R2P27930 398 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 HMGCS2P54868 508 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 BASP1P80723 227 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 GHRHRQ02643 423 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 WDTC1Q8N5D0 677 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 PTPRN2Q92932 1015 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 SPDL1Q96EA4 605 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 CISHQ9NSE2 258 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 RABGEF1Q9UJ41 708 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 CHMP2BQ9UQN3 213 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 CNTNAP2Q9UHC6 1331 aa17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 MYH9P35579 1960 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-228ENST00000640306 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 RAP1GAPP47736 663 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 ERFP50548 548 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 GEMIN4P57678 1058 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 TFAMQ00059 246 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 NR1H3Q13133 447 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 DPH6Q7L8W6 267 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 LRRC6Q86X45 466 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 CPT1BQ92523 772 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 PRR11Q96HE9 360 aaPredicted RBP17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 PIK3R2O00459 728 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 PEX11AO75192 247 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 TBXAS1P24557 533 aaPredicted RBP17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 CCDC15Q0P6D6 951 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 UNC45BQ8IWX7 931 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 PALM2Q8IXS6 379 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 FAM71DQ8N9W8 422 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 LRRN4Q8WUT4 740 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 SLC7A3Q8WY07 619 aa17.38■□□□□ 0.37
HNRNPU-228ENST00000640306 A0A0B4J269 797 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 CFAP69A5D8W1 941 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 MAGEB2O15479 319 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 DCTN3O75935 186 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 TMEM63AO94886 807 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 SKIV2L2P42285 1042 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 RFWD3Q6PCD5 774 aa17.37■□□□□ 0.37
HNRNPU-228ENST00000640306 KIAA0319LQ8IZA0 1049 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms