RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FRYLO94915 3013 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 FAM237AA0A1B0GTK4 181 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 ANTXRLA6NF34 631 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 ZNF197O14709 1029 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 EIF3DO15371 548 aaKnown RBP eCLIP8.43□□□□□ -1.06
PNKP-229ENST00000637897 PRR29P0C7W0 189 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CCDC192P0DO97 292 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CHRNB1P11230 501 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 PSMC3P17980 439 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CYP2F1P24903 491 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 GABRR2P28476 465 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 GDI1P31150 447 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 ABCD1P33897 745 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 TXLNAP40222 546 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 AFMP43652 599 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CASP4P49662 377 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CACNA2D1P54289 1103 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 ASIC1P78348 528 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 FAM26FQ5R3K3 315 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 C1orf220Q5T0J3 134 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CYP4A22Q5TCH4 519 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 NAIF1Q69YI7 327 aaPredicted RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 FAM171BQ6P995 826 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 TSSK4Q6SA08 328 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 USP37Q86T82 979 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 MFSD6LQ8IWD5 586 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 NELFCDQ8IXH7 590 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CCDC65Q8IXS2 484 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CSGALNACT2Q8N6G5 542 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 SUMF1Q8NBK3 374 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 PAGE5Q96GU1 130 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 SLC22A12Q96S37 553 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 SEPT5Q99719 369 aaPredicted RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 MRPL45Q9BRJ2 306 aaKnown RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 PI4K2AQ9BTU6 479 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 OXCT2Q9BYC2 517 aaPredicted RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 OSBPL6Q9BZF3 934 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 XYLT2Q9H1B5 865 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 KCTD10Q9H3F6 313 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 SLC39A2Q9NP94 309 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 CRTAC1Q9NQ79 661 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 TRPV5Q9NQA5 729 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 DDX43Q9NXZ2 648 aaKnown RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 GTF3C4Q9UKN8 822 aa8.43□□□□□ -1.06
PNKP-229ENST00000637897 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.43□□□□□ -1.06
PNKP-229ENST00000637897 ATG2BQ96BY7 2078 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 A0A1B0GVL5 298 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 STK25O00506 426 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 VNN1O95497 513 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 PAX3P23760 479 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 WEE1P30291 646 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 EPHB3P54753 998 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 NLRP12P59046 1061 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 USP46P62068 366 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 FAM160A1Q05DH4 1040 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 TNK2Q07912 1038 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 CYP24A1Q07973 514 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 BFSP1Q12934 665 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 MTAPQ13126 283 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 PLD1Q13393 1074 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ALCAMQ13740 583 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 UBXN2BQ14CS0 331 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 DDR2Q16832 855 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 MGAT5BQ3V5L5 792 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 SV2CQ496J9 727 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 GPR158Q5T848 1215 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 PKN3Q6P5Z2 889 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 RBM43Q6ZSC3 357 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 TRAPPC11Q7Z392 1133 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 SYCP3Q8IZU3 236 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 LRRC52Q8N7C0 313 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 IQUBQ8NA54 791 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 LEMD2Q8NC56 503 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 TTC8Q8TAM2 541 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 DNASE1L2Q92874 299 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 USP13Q92995 863 aaPredicted RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 ACBD6Q9BR61 282 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 TRMT61BQ9BVS5 477 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 SDCBP2Q9H190 292 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ATXN3LQ9H3M9 355 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 CUEDC2Q9H467 287 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 GOLPH3LQ9H4A5 285 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 RTN4Q9NQC3 1192 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 HPS4Q9NQG7 708 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 PRMT8Q9NR22 394 aaPredicted RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 RBM12Q9NTZ6 932 aaKnown RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
PNKP-229ENST00000637897 GTSE1Q9NYZ3 720 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ITGA11Q9UKX5 1188 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms