RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	TADA2A	O75478	443 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	MICAL2	O94851	1124 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	KIF4A	O95239	1232 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	FGB	P02675	491 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	CALB1	P05937	261 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	ACR	P10323	421 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	MMP8	P22894	467 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	PCSK1	P29120	753 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	BRCC3	P46736	316 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	HADHB	P55084	474 aa	Known RBP	12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	MON1B	Q7L1V2	547 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	ERICH1	Q86X53	443 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	THEM5	Q8N1Q8	247 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	LRRC43	Q8N309	656 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	C12orf29	Q8N999	325 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	MSANTD4	Q8NCY6	345 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	ZNF653	Q96CK0	615 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	ARHGEF26	Q96DR7	871 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	ALS2CR12	Q96Q35	445 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	DPEP3	Q9H4B8	488 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	DDX43	Q9NXZ2	648 aa	Known RBP	12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	UVRAG	Q9P2Y5	699 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	CDH9	Q9ULB4	789 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	VWA8	A3KMH1	1905 aa		12.48	□□□□□ -0.41
CLN6-223	ENST00000637823	CTAGE9	A4FU28	777 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823		I3L4J1	428 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823		M0QYV0	167 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	MTA2	O94776	668 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	ITGB1	P05556	798 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	GALT	P07902	379 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	SETSIP	P0DME0	302 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	GPD2	P43304	727 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	SLC11A1	P49279	550 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	WDR5	P61964	334 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	FPGS	Q05932	587 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	PTP4A2	Q12974	167 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	GOLGA7B	Q2TAP0	167 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	PAN2	Q504Q3	1202 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	OVOS1	Q6IE37	1185 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	ANKRD52	Q8NB46	1076 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	B3GALNT2	Q8NCR0	500 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	C1orf131	Q8NDD1	294 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	TPCN2	Q8NHX9	752 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	HASPIN	Q8TF76	798 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	UBE2Q2	Q8WVN8	375 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	BAD	Q92934	168 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	ZNF689	Q96CS4	500 aa	Predicted RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	HNRNPAB	Q99729	332 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	ACBD6	Q9BR61	282 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	HTATIP2	Q9BUP3	242 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	CTTNBP2NL	Q9P2B4	639 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	HESX1	Q9UBX0	185 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	CNOT8	Q9UFF9	292 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	ADAM28	Q9UKQ2	775 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	TSPAN16	Q9UKR8	245 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	JRKL	Q9Y4A0	524 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	PCDHGC5	Q9Y5F6	944 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	PTPRD	P23468	1912 aa		12.47	□□□□□ -0.41
CLN6-223	ENST00000637823	CARNS1	A5YM72	827 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823		F8W810	466 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	SYN3	O14994	580 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	HCRT	O43612	131 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	BCAR1	P56945	870 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	SNX16	P57768	344 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	DEFB103A	P81534	67 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	ELAVL2	Q12926	359 aa	Known RBP	12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	PKDCC	Q504Y2	493 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	MMS22L	Q6ZRQ5	1243 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	C16orf59	Q7L2K0	433 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	C7orf61	Q8IZ16	206 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	SYCE1	Q8N0S2	351 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	UBA3	Q8TBC4	463 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	STK32A	Q8WU08	396 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	NAPG	Q99747	312 aa	Predicted RBP	12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	LPIN3	Q9BQK8	851 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	SYT15	Q9BQS2	421 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	MIS12	Q9H081	205 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	CWH43	Q9H720	699 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	MRPL47	Q9HD33	250 aa	Known RBP	12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	FAM49B	Q9NUQ9	324 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	CYTH4	Q9UIA0	394 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	STRIP2	Q9ULQ0	834 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	CAPN6	Q9Y6Q1	641 aa		12.46	□□□□□ -0.41
CLN6-223	ENST00000637823	NLRC5	Q86WI3	1866 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	FAM170A	A1A519	330 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	GRID2IP	A4D2P6	1211 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	ATP2C2	O75185	946 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	PALM	O75781	387 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	OAZ2	O95190	189 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	CCDC130	P13994	396 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	RRM1	P23921	792 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	ACAT1	P24752	427 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	GABRB2	P47870	512 aa		12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	ALDH7A1	P49419	539 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	BST2	Q10589	180 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-223	ENST00000637823	TUBB2A	Q13885	445 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms