RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 DPCR1Q3MIW9 517 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 PABPC1LQ4VXU2 614 aaKnown RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 FAM171BQ6P995 826 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 VSTM1Q6UX27 236 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 SCARA5Q6ZMJ2 495 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 PDZD4Q76G19 769 aaPredicted RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 TDRD5Q8NAT2 981 aaKnown RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 EHBP1Q8NDI1 1231 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 OR10T2Q8NGX3 314 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 MYCBPAPQ8TBZ2 947 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 KBTBD7Q8WVZ9 684 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 SLC35C1Q96A29 364 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 ZNF707Q96C28 371 aaPredicted RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 CNOT6LQ96LI5 555 aaKnown RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 CEP295NLQ96MC4 621 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 NT5C1BQ96P26 610 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 GCNAQ96QF7 691 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 TMEM209Q96SK2 561 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 RTP3Q9BQQ7 232 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 MRPL45Q9BRJ2 306 aaKnown RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 MED10Q9BTT4 135 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 PI4K2AQ9BTU6 479 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 GPR88Q9GZN0 384 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 NIF3L1Q9GZT8 377 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 POMKQ9H5K3 350 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 ASAH2Q9NR71 780 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 MRPS23Q9Y3D9 190 aaKnown RBP8.77□□□□□ -1.01
PNKP-226ENST00000636840 VWA8A3KMH1 1905 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 CLUHO75153 1309 aa8.77□□□□□ -1.01
PNKP-226ENST00000636840 A0A0C4DFX4 3053 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 TCF20Q9UGU0 1960 aaKnown RBP8.76□□□□□ -1.01
PNKP-226ENST00000636840 LOC730098B7Z3J9 87 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 TRIM66O15016 1216 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 MICAL2O94851 1124 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 GRIK1P39086 918 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 MAGEA11P43364 429 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 NDST1P52848 882 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 SLC8A3P57103 927 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 TPM4P67936 248 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 ZP2Q05996 745 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 MAN2A1Q16706 1144 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 CFAP221Q4G0U5 840 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 CBWD6Q4V339 395 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 ARHGAP15Q53QZ3 475 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 MDH1BQ5I0G3 518 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 CBWD3Q5JTY5 395 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 CBWD5Q5RIA9 395 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 SCARA3Q6AZY7 606 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 SPOPLQ6IQ16 392 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 GBP6Q6ZN66 633 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 DNAJB7Q7Z6W7 309 aaPredicted RBP8.76□□□□□ -1.01
PNKP-226ENST00000636840 LRRTM3Q86VH5 581 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 OSTM1Q86WC4 334 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 SCN4BQ8IWT1 228 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 CRYBG2Q8N1P7 616 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 B3GALNT2Q8NCR0 500 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 PSMG2Q969U7 264 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 TUBGCP2Q9BSJ2 902 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 BCO2Q9BYV7 579 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 ELOVL4Q9GZR5 314 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 SMYD3Q9H7B4 428 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
PNKP-226ENST00000636840 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
PNKP-226ENST00000636840 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 DNMT3BQ9UBC3 853 aaKnown RBP8.76□□□□□ -1.01
PNKP-226ENST00000636840 UXTQ9UBK9 157 aaPredicted RBP8.76□□□□□ -1.01
PNKP-226ENST00000636840 ZMYM5Q9UJ78 669 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 NFE2L3Q9Y4A8 694 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 YIPF1Q9Y548 306 aa8.76□□□□□ -1.01
PNKP-226ENST00000636840 MYBPHLA2RUH7 354 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 BECN2A8MW95 431 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 KCNJ18B7U540 433 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 TNFRSF10AO00220 468 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 DLL1O00548 723 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 CAVIN2O95810 425 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 RHOP08100 348 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 MYL4P12829 197 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 ALADP13716 330 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 CD58P19256 250 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 BDNFP23560 247 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 CYP2F1P24903 491 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 EEF1GP26641 437 aaKnown RBP8.75□□□□□ -1.01
PNKP-226ENST00000636840 CDC25CP30307 473 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 MFAP3P55082 362 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 PSMC1P62191 440 aaKnown RBP8.75□□□□□ -1.01
PNKP-226ENST00000636840 MYL5Q02045 173 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 TYRO3Q06418 890 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 LRMPQ12912 555 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 KCNJ12Q14500 433 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 ENOSF1Q7L5Y1 443 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 ACOT1Q86TX2 421 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 GIPC2Q8TF65 315 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 SEMA4DQ92854 862 aa8.75□□□□□ -1.01
PNKP-226ENST00000636840 TATDN2Q93075 761 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms