RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 PSMD6Q15008 389 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 KNOP1Q1ED39 458 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 SOWAHAQ2M3V2 549 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 TRAPPC11Q7Z392 1133 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 RSPRY1Q96DX4 576 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 PAGE5Q96GU1 130 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 ABCB6Q9NP58 842 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 TRPV5Q9NQA5 729 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 USP25Q9UHP3 1055 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 GTF3C4Q9UKN8 822 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 ATP6V1DQ9Y5K8 247 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 PIAS3Q9Y6X2 628 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 SCN1AP35498 2009 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 NCANO14594 1321 aa16.1■□□□□ 0.17
CACNA1A-230ENST00000636768 COL4A3Q01955 1670 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 PRR23AA6NEV1 266 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 LAMTOR5O43504 91 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 EXOC3O60645 756 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 GPR15P49685 360 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 RPL10AP62906 217 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 DPH6Q7L8W6 267 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 ASCL5Q7RTU5 278 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 GOLGA5Q8TBA6 731 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 CSGALNACT1Q8TDX6 532 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 MKNK1Q9BUB5 465 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 NDRG2Q9UN36 371 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 ZDHHC9Q9Y397 364 aa16.09■□□□□ 0.17
CACNA1A-230ENST00000636768 GABRDO14764 452 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CHADO15335 359 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 HCRTO43612 131 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CLSTN1O94985 981 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 PRAMEF12O95522 483 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 SP9P0CG40 484 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CSH1P0DML2 217 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CSH2P0DML3 217 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CYP2F1P24903 491 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 FCHO2Q0JRZ9 810 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 DDR2Q16832 855 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 CCDC142Q17RM4 750 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 KMT5BQ4FZB7 885 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 SDHAF4Q5VUM1 108 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 ZC3H14Q6PJT7 736 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 C12orf56Q8IXR9 622 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 STKLD1Q8NE28 680 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 FAM3CQ92520 227 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 PKMYT1Q99640 499 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 SYT15Q9BQS2 421 aa16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 ZFHX2Q9C0A1 2572 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-230ENST00000636768 KLRC4O43908 158 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 PHACTR2O75167 634 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 MYL1P05976 194 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 HMGA1P17096 107 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 AVPR1AP37288 418 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 SYKP43405 635 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 RPS9P46781 194 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 KPNA1P52294 538 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 NLRP12P59046 1061 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 TNNC1P63316 161 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 STK4Q13043 487 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 PSMD2Q13200 908 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 TRPC3Q13507 836 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 C4orf50Q6ZRC1 276 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 SCN4BQ8IWT1 228 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 KBTBD7Q8WVZ9 684 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 CLDN23Q96B33 292 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 FUBP3Q96I24 572 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 SCAND2PQ9GZW5 306 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 SMG9Q9H0W8 520 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 OBP2AQ9NY56 170 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 ZMYM5Q9UJ78 669 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 CDH9Q9ULB4 789 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 R4GN57 208 aa16.07■□□□□ 0.16
CACNA1A-230ENST00000636768 MYBPHLA2RUH7 354 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 SHISA7A6NL88 538 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 ARNTLO00327 626 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 ATP2C2O75185 946 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 CST3P01034 146 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 PDGFRBP09619 1106 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 CCNE1P24864 410 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 LMO2P25791 158 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 DDX6P26196 483 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 WEE1P30291 646 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 NDUFA8P51970 172 aa16.06■□□□□ 0.16
CACNA1A-230ENST00000636768 BIRC3Q13489 604 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms